Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00495 ATGGTTTCTGATAGATCAAAATCTGTGAGATTTCAAGATGAACTTGAGACAAATAAGTTAATGGACAACAACAAAGAAAGTCACTTGTCAATGGTGTCCTTTAATGAAGTGAGTAATGATAAACAAAAGGGTGGGAAGGATGCAATAGGCAACAAGTCCTCTGAGGATGGAAGAGAACTTTCAAGGGTCTTCTCTGAGGATTATGATGCAGCAGAGATTTTGGTATTGGATCCTAGGGGACATAGAGTAAACACATGGAACAAAATTTTCTTAGCGGCGTGTTTGCTTTCGTTATTCGTGGATCCTCTATTCTTTTACTTACCAGTGGCTAAGAAAGACAAGTGCATTGATATGTCAGTTGGTCTTGAAGTGTTCCTCACCATAATCCGATCATTGATTGATGCATTTTACATTATTCAGATTTATTTTCGGTTTCAAACCGCTTATATTGCTCCTTCCTCTCGTGTTTCTGGTAGAGGAGAGCTTATCATAGACTCTTCAAAAATTGCATCGAAGTACATGCGAAGAGACTTCTGGCTTGATCTAATGGCTGCTCAACCACTTCCACAGGTATTGATTTGGGCAGTAATTCCAAATCTAAAAGGGTCTCAAATGATTGCTTCAAGGCATATTTTACGCCTTGCTTCCATTTTCCAGTACCTCTTGAGATTGTATCTTATTTATCCTCTATCATCTGAAATCGTCAAGGCAAATGGGGTAATGATGGAAAAGGCATGGGCTGGGGCAGCATATAATCTGATGCTCTATATGCTAGCTAGTCATGTTTTAGGATCCTCTTGGTACCTGTTATCAATTGAACGCCAGAATGAATGTTGGAAGAAAGTTTGTACACTGCAGTACCCACACTGCCAGTATCGTTATCTTGATTGTCAAAGCATGGGTGACCCGGATAGGATTGCTTGGTTAAGATCAAGTAATCTCTCAAGTCTATGTGATCAAAGCAGTGATTTCTTTCAATTTGGCATCTTTGCTGATGCTCTCAATTTGGAAGTTACGGCCTCTAAATTCTTCAACAAATACTGTTACTGTCTCTGGTGGGGACTAAGGAATCTTAGCTCTGTGGGACAGAATCTCTTAACTGGCACACGTGTTGCAGAGATCAATTTTGCTGTGATCATTGCAGTTCTTGGATTGGTGCTTTTTGCATTGCTTATAGGCAATATGCAAACCTACCTGCAATCCACCACTACACGGCTAGAAGAATGGAGAATAAGAAGGACAGATACAGAAAGATGGATGCATCACAGGCAGCTCCCCCGTTACCTAAAGCAAAACGTGCGACGTCATGAACAATTCAGATGGGTTGCTACTAGGGGAGTTGATGAGGAAACTATTCTCAGAGACCTTCCCATAGATCTAAGACGTGACATCAAACGCCACCTTTGCCTCAATCTAGTCCGACAAGTACCACTATTTGATCAAATGGATGAAAGGATGCTAGATGCAATATGTGAAAGGCTGAAACCTTCTCTTTTCACTCCAGGCGCTTGTGTGGTTCGCGAGGGTGACCTGGTGAACGAGATGCTTTTCATTGTTCGAGGACGCCTAGATTCTTGCACCACCAACGGTGGCAGAACAGGTTTCTTCAACACCTGCAGACTTGGCTCTGGTGACTTCTGTGGTGAAGAGCTCCTGCCATGGGCCTTGGACCCTCGTCCAACGGTAGTCCTTCCTTCATCAACTCGCACGGTGAAAGCCATCACCGAAGTGGAAGCCTTTGCACTCATTGCAGGGGACTTGAAGTTTGTGGCAGCACAATTCAGAAGGCTGCACAGCAAACAACTGAGGCACACTTTTAGGTTCCACTCCCACCAGTGGAGGACTTGGGCTGCGTGCTTCATACAAGCAGCATGGTTCAGGTATAAAAGAATAAAGGAGACAAGTGAACTCAAGAGAAAGGAGAATCTGATGATGGCCTTTGTTCCTGGAACAACTGGCTCTGAACATTTCTCTGCACCTCTTCAGGCCCCAAAGGGCACAATGTATGCTGCAAAACTAGCTTCCAGCCCAAGGAAAGGTAGGAGCCTAAGATATGGGCCTGAACTTGACATTCTTGGTTCATTGAGGAAGCCCCTTGAACCAGACTTTACTGATGATGAGTGA 2124 0.4364 MVSDRSKSVRFQDELETNKLMDNNKESHLSMVSFNEVSNDKQKGGKDAIGNKSSEDGRELSRVFSEDYDAAEILVLDPRGHRVNTWNKIFLAACLLSLFVDPLFFYLPVAKKDKCIDMSVGLEVFLTIIRSLIDAFYIIQIYFRFQTAYIAPSSRVSGRGELIIDSSKIASKYMRRDFWLDLMAAQPLPQVLIWAVIPNLKGSQMIASRHILRLASIFQYLLRLYLIYPLSSEIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSSWYLLSIERQNECWKKVCTLQYPHCQYRYLDCQSMGDPDRIAWLRSSNLSSLCDQSSDFFQFGIFADALNLEVTASKFFNKYCYCLWWGLRNLSSVGQNLLTGTRVAEINFAVIIAVLGLVLFALLIGNMQTYLQSTTTRLEEWRIRRTDTERWMHHRQLPRYLKQNVRRHEQFRWVATRGVDEETILRDLPIDLRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPSLFTPGACVVREGDLVNEMLFIVRGRLDSCTTNGGRTGFFNTCRLGSGDFCGEELLPWALDPRPTVVLPSSTRTVKAITEVEAFALIAGDLKFVAAQFRRLHSKQLRHTFRFHSHQWRTWAACFIQAAWFRYKRIKETSELKRKENLMMAFVPGTTGSEHFSAPLQAPKGTMYAAKLASSPRKGRSLRYGPELDILGSLRKPLEPDFTDDE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00495 707 Gene3D Helix hairpin bin 404 469 - -
Gma10g00495 707 PRINTS EAG/ELK/ERG potassium channel family signature 141 150 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma10g00495 707 PRINTS EAG/ELK/ERG potassium channel family signature 258 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma10g00495 707 PRINTS EAG/ELK/ERG potassium channel family signature 347 364 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma10g00495 707 PRINTS EAG/ELK/ERG potassium channel family signature 373 384 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma10g00495 707 PRINTS EAG/ELK/ERG potassium channel family signature 391 400 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma10g00495 707 PRINTS EAG/ELK/ERG potassium channel family signature 441 448 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma10g00495 707 PANTHER PROTEIN CNGC15A 28 705 - -
Gma10g00495 707 SUPERFAMILY Voltage-gated potassium channels 77 400 - -
Gma10g00495 707 MobiDBLite consensus disorder prediction 1 23 - -
Gma10g00495 707 Gene3D - 103 402 - -
Gma10g00495 707 SUPERFAMILY cAMP-binding domain-like 407 598 IPR018490 -
Gma10g00495 707 Pfam Ion transport protein 85 405 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma10g00495 707 CDD CAP_ED 478 609 IPR000595 -
Gma10g00495 707 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 28 705 - -
Gma10g00495 707 MobiDBLite consensus disorder prediction 1 26 - -
Gma10g00495 707 ProSiteProfiles cAMP/cGMP binding motif profile. 478 563 IPR000595 -
Gma10g00495 707 SMART cnmp_10 478 609 IPR000595 -
Gma10g00495 707 Gene3D Jelly Rolls 476 596 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00495 Gma-Chr10 4961015 4966156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00495 57 706 Ion Channels AT2G28260 63.846 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00495 K05391 - gmx:100815543 1424.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00495 10 4961015 4966156 Gma10g00495 10 4961015 4966156 ECH