Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00486 ATGGCTAAGGGAATCAGAAACCTAAGTTCGTGGATGGAGGTTGCCCCGGCACCAATAATTTTCCCAACAAAGCCTTCTAATTCGCCTGCTTTGGAGACCATCACAGAAGAAGTTGCTGAGGATGATGAAGCTTCCATGAATACCCTTCTCAAGTGGCCAGAGTGTATTGGATTAAGAAGCAAAACAGTTCGCTATCGCTGGGACAGTTTTTGTTTGACACCACTCGGAAATTTCTCTGCGTCTCTCCTATTTTTTCTGAATCTAACATTAACAACAAGAATGGCATCCAACAGGGGTCAAGGTGGAATTCAGCAGCTGTTGGCTGCTGAACAAGAGGCACAACGGATTGTGAATGCTGCGAAAAATGAAAAATTGGCTAGGTTGAAGCAAGCCAAGGAAGAGGCTGAAAAGGAGATTGCTCAATACCGAGCTCAACTAGAGGCTGAGTTTCAAAAGAAAGTGTCAGACAGTACTGGAGATTCTGGAGCTAATGTCAAGCGGCTTGAGCAAGAGACTGATGAAAAAATCCAGCACCTGAAAACGGAGGCTGCAAGAATATCGGATGATGTTGTTGCCATGCTTCTCAAGCATGTAACAAGTGTGAAAAATTAG 612 0.4428 MAKGIRNLSSWMEVAPAPIIFPTKPSNSPALETITEEVAEDDEASMNTLLKWPECIGLRSKTVRYRWDSFCLTPLGNFSASLLFFLNLTLTTRMASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEAEKEIAQYRAQLEAEFQKKVSDSTGDSGANVKRLEQETDEKIQHLKTEAARISDDVVAMLLKHVTSVKN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00486 203 Pfam Vacuolar (H+)-ATPase G subunit 100 202 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gma10g00486 203 Gene3D - 93 203 - -
Gma10g00486 203 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 94 203 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gma10g00486 203 Coils Coil 103 152 - -
Gma10g00486 203 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 99 202 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gma10g00486 203 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 94 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00486 Gma-Chr10 4822318 4830142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00486 94 203 Primary Pumps ATPases(2) AT3G01390 75.455 1.11e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00486 K02152 - gmx:100499803 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00486 10 4822318 4830142 Gma10g00486 10 4822318 4830142 ECH