Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00484 ATGAAGATTCCTTGTTTCTCTTGTTTCTCGCCATCGACCACTGAAAAAAACAACAACAACGATTACCCAGATGAAGAGATCAACGATGAGAGCTTTCGTTTATTCACTCACAAGCAATTGAAATTAGCCACGCGCAATTTTCATTCCTCGGAGAAGGTTGGAGAAGGTGGCTTTGGATCTGTCTTTAAGGGGAAGCTTGTGGATGGATCTTTTGTGGCGGTGAAAGTGCTTTCGGTTGAGGTGGAATCCATGCGTGGAGAGAGGGAATTTGTGGCGGAATTGGCCACACTTGCAAACATCAAGCACCAAAATCTTGTAAGCCTAAAAGGGTGTTGTGTGGAAGGTGCTTATAGATATTTGGTCTATGATTATATGGAGAACAATAGCCTCTACAACACTTTCTTAGGTTCGGAAGAGAGAAGGATGAGATTCAATTGGGAAATAAGGAAGGACGtatccataggtgtggctcgggggcttgactttctccatgaggagcttaagcctcatatcgtacatagagacatcaaagccaaaaacatacttcttgatagaaatttcataccaaaggtttcagattttggtctggcaaaattGCTGAGAGACGAAACATCTTACATCAGCACTCGGGTAGCAGGGACATTGGGTTATCTAGCTCCAGAATATGCAAATTCCGGCCAGGTTTCGCGAAAATCAGATGTTTATAGCTTCGGAGTGTTGCTTTTACAAATTGTGAGTGGCCTAGCAGTGGTGGATGCCTATCAAGACATTGAACGTTTCATAGTGGAGAAGGCGTGGGCAGCGTATCAATCTAATGATCTATTAAAATTGGTGGATCCCATGCTTAATATGAATTTTCCAGAGGAAGAGGCATTGAAATTCCTCAAGGTGGGGCTGCTTTGCGTGCAAGAAACTGCCAAGCTTAGGCCACGAATGTCAGAAGTTGTAGAGAAGTTGACCAAGGACATTGATATGAGAGATGTTCACATTTCGAAGCCAGGGTTCGTTGCTGATCTCAGGAACATCAGAATCAAACAACAAAACCTAAACTCGTCCGAGGAATCAAGTTCTGCTGGAGCAACCTTTACAAGCTCCATTTCGAGTTCGGCCAATCTTGCTCGTTATTTATTAGATTGA 1137 0.3808 MKIPCFSCFSPSTTEKNNNNDYPDEEINDESFRLFTHKQLKLATRNFHSSEKVGEGGFGSVFKGKLVDGSFVAVKVLSVEVESMRGEREFVAELATLANIKHQNLVSLKGCCVEGAYRYLVYDYMENNSLYNTFLGSEERRMRFNWEIRKDVSIGVARGLDFLHEELKPHIVHRDIKAKNILLDRNFIPKVSDFGLAKLLRDETSYISTRVAGTLGYLAPEYANSGQVSRKSDVYSFGVLLLQIVSGLAVVDAYQDIERFIVEKAWAAYQSNDLLKLVDPMLNMNFPEEEALKFLKVGLLCVQETAKLRPRMSEVVEKLTKDIDMRDVHISKPGFVADLRNIRIKQQNLNSSEESSSAGATFTSSISSSANLARYLLD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00484 378 ProSiteProfiles Protein kinase domain profile. 47 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00484 378 PANTHER RECEPTOR-LIKE KINASE 5 351 - -
Gma10g00484 378 Pfam Protein tyrosine and serine/threonine kinase 49 319 IPR001245 GO:0004672|GO:0006468
Gma10g00484 378 CDD STKc_IRAK 53 321 - -
Gma10g00484 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Gma10g00484 378 SMART serkin_6 47 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00484 378 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 351 - -
Gma10g00484 378 Gene3D Transferase(Phosphotransferase) domain 1 125 332 - -
Gma10g00484 378 SUPERFAMILY Protein kinase-like (PK-like) 20 319 IPR011009 -
Gma10g00484 378 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Gma10g00484 378 Gene3D Phosphorylase Kinase; domain 1 9 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00484 Gma-Chr10 4783501 4785875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00484 35 370 Receptor kinase-like Gene Family AT1G53430 45.906 4.42e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma10g00484 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00484 - - gmx:100813945 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00484 10 4783501 4785875 Gma10g00484 10 4783501 4785875 ECH