Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00481 ATGGCAACTGAAGCTGCAGGATCTTCCAAGGACAACATTAACCAAGGCCATGGCACTACTGAAAATAGGGCTGATACCCCAATTCAAAAGGGTCCAGCATCATCTGAAATAACCGAGGAATTCCCAAGAGAACAACATGGGACAAGGCAAAACCTTATCTTGGATATTCCTGCAATATCTCAGGAGGAAGCAAGAAAAGATTATGCGAGGATAAACATGCCTCTAACTTCTCCTCCAAGAAGACTGATTTTTCCTCCCGGTCTAAGTCCTGTTTTCCCAAGAAGCAAAAAATACCCAGTGCTACTTGTCACACCCAGAGGGAAGAAAACATCATCCTTACCGGTAACCGCAATTGCTTATTCAAATCCAGGGTCTGTACATGGAGGGAACTTGGCTTTTGCAGAAACAGCTAAGAAAGAACTGAATTTTCCAATTCGTCGGTCCCGTTCAGCACCTATGCTTAACAAAGAAGGTAACTCGCCTGTACGTGGCATGTTTCGTATAGTTCCGACCACACTACGATTAGATGAGAAAATTGCCACAACACCACCTATGACATCTCCAATTCATGATACTGTTAAAAATGAGGATGTTGGTGAAGATATTCCTGAAGAAGAAGCTGTCTGTAGAATTTGTATGGTTGAACTTGGAGAAGGTGGTAATACTTTCAAATTGGAGTGTGGCTGCAAAGGTGACCTTTCATTGGCACACAGAGGATGTGCAGTCAAATGGTTTACCATTAAAGGTAATAGAACATGCGATGTGTGCAAGCAAGAAGTTCAGAATCTAACTGTCACTCTTTTACGAGTTcaaaatggtctggcacaaaatggtctggcacaaaatggtctggcacaTAACATGCTAGGGGCTGATGCTTCTCGATACAGGTTTTGGCCGGATTTTGCCATTCTTGTTGTTATCAACATGCTGGCTTACTTTTGGTTTCATGTGTCTAATATGGGATCTGGTACTATAGTCCATTGTCTCGCATTTTCATGTGTATTGGGTTCTCTTGCAAGCTTTACAGCTACAGTAATGGTGAGGAGAAATCATGTATGGATTTATGCAACTGTTCAGTTTTGTCTAGTGTTTCTCATTGAACATCTTTTCTTCTCACTGTTTCATAGGTCAAATATCGATGCTGTTACATGTACTGGGATGGCAGTTGTAATGTGTGGAAATTTTATTCTTACGGAGATTTTGAAGTGGAGGGGAAGATCACTGGCTCAGTCGAATCAACAACAAGGTTCCCAAGAAGCAGTACCGCCACCTGATCAATCATCTACAATCCCTCATCAAGCTCAGATTGGTTCTGAACAAACTGAAAGTAATTTGGGAGAGTCTCATGCACAGAGGAGTTGA 1365 0.4044 MATEAAGSSKDNINQGHGTTENRADTPIQKGPASSEITEEFPREQHGTRQNLILDIPAISQEEARKDYARINMPLTSPPRRLIFPPGLSPVFPRSKKYPVLLVTPRGKKTSSLPVTAIAYSNPGSVHGGNLAFAETAKKELNFPIRRSRSAPMLNKEGNSPVRGMFRIVPTTLRLDEKIATTPPMTSPIHDTVKNEDVGEDIPEEEAVCRICMVELGEGGNTFKLECGCKGDLSLAHRGCAVKWFTIKGNRTCDVCKQEVQNLTVTLLRVQNGLAQNGLAQNGLAHNMLGADASRYRFWPDFAILVVINMLAYFWFHVSNMGSGTIVHCLAFSCVLGSLASFTATVMVRRNHVWIYATVQFCLVFLIEHLFFSLFHRSNIDAVTCTGMAVVMCGNFILTEILKWRGRSLAQSNQQQGSQEAVPPPDQSSTIPHQAQIGSEQTESNLGESHAQRS 454
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00481 454 SUPERFAMILY RING/U-box 205 260 - -
Gma10g00481 454 MobiDBLite consensus disorder prediction 1 51 - -
Gma10g00481 454 MobiDBLite consensus disorder prediction 412 454 - -
Gma10g00481 454 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 102 451 - -
Gma10g00481 454 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 4 97 - -
Gma10g00481 454 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 195 266 IPR013083 -
Gma10g00481 454 Pfam RING-variant domain 209 256 IPR011016 GO:0008270
Gma10g00481 454 CDD RING_CH-C4HC3_MARCH 209 257 - -
Gma10g00481 454 PANTHER OS02G0165000 PROTEIN 102 451 - -
Gma10g00481 454 PANTHER OS02G0165000 PROTEIN 4 97 - -
Gma10g00481 454 SMART ringv_2 208 257 IPR011016 GO:0008270
Gma10g00481 454 MobiDBLite consensus disorder prediction 1 33 - -
Gma10g00481 454 ProSiteProfiles Zinc finger RING-CH-type profile. 201 263 IPR011016 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma10g00481 Gma-Chr10 4698119 4705248 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00481 148 320 C3H Transcription Factor Family AT2G37950 26.776 5.01e-13 66.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00481 - - gsj:114369638 923.309
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00481 10 4698119 4705248 Gma10g00481 10 4698119 4705248 ECH