Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00472 ATGGCCGACGACTTCGAATTCGCCGACAAAGTCCCTCCTTCCTTCGATCGCGCGGGTTCAAAAGGGTTCAACCCAGCTTTAATTGTTCTCCTGCTTGTTGGTGGGTTGCTGTTGACATTCCTCATTGGAAACTATGTACTCTACACATATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCAGTCTCAAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAGGGCGTCTCTGCACCTGGAGAGTAG 249 0.4859 MADDFEFADKVPPSFDRAGSKGFNPALIVLLLVGGLLLTFLIGNYVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00472 82 Pfam DNA binding protein S1FA 19 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gma10g00472 82 MobiDBLite consensus disorder prediction 58 82 - -
Gma10g00472 82 PANTHER DNA-BINDING PROTEIN S1FA2 3 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gma10g00472 82 MobiDBLite consensus disorder prediction 1 21 - -
Gma10g00472 82 MobiDBLite consensus disorder prediction 58 72 - -
Gma10g00472 82 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00472 Gma-Chr10 4597677 4600042 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Gma10g00472 S1FA 3.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00472 - - gmx:100500059 147.517