Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00466 ATGGGGAGGAAAGGAAATAGTTGGTTTTCTACTGTGAAGAAAGCTCTAAGCCCTGAGCCAAAGGAGAAGAACGATCAGAATTCAAGTAGATCAAAGAAGAAATGGTTTCAGAAGCAAAAATTGCAGACTTCAGAATCAACCTCACAATCTGATAATGCACCACCTCTTCCTCTACCTGAGATTATTTTAACTCATGTCGAGAGTGAAATCAACCATGATCGGGTTGAAGTTGCAACTGCAGTGGATGCTGAGGAACCTGTTCTTGCAGTTCAGACAGCAGCTGCTGAGGTTCAAGCCACAACAATTGTTCAGTTTGACAATAAACCAACAGAAGAAATGGCAGCAATCAGGATTCAAAAAGCTTTTCGTGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGTTGGTCAGGTTGAGATCACTGATGGAAGGGCCAGTGGTGAAACGTCAAGCCATTAGTACCCTCCGTTCTATGCAGACTTTTGCTCATTTGCAAACTCAGATTCGTTCTAGGAGGCTCAGGATGTTAGAGGAGAATCAAGCACTACAAAAACAGCTCTTACAGAAGCACGCAAAAGAGCTAGAGAGCATGCGGCTTGGGGAGGAATGGGATGACAGCGTACAATCAAAAGAACAAGTTGAAGCCAAGTTACTGAGCAAGTATGAAGCTTCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGCATAACTGGAAGAATGCATCAAGATCTATAAACCCAATGTTCATGGATCCAACCAATCCAGCCTGGGGTTGGAGTTGGTTGGAACGATGGACGGCAGCCCGGCCCTGGGAGAGCCATAGCCAGATGGAGAAAGAGAAGAATGGCAATAAATCTCTAAGAAGTTCTAGCCGTGGCATTACCAGTGCTGAAATCAGCAAAGCATTTGCTAAGTTTCAGCTCAATTCTGAGAAGCATTCTCCAACAGCCAGCCAAAATCCAGGCTCACCTAACTTCGAGTCGCATTCCCAATCCCATTCAAATCCTCCCAAGCCACCTTCTCCAGCAGTTGCTAAGAAACTGAAGAAAGCAAGTCCTAAGGATATCTTGGCTATAGATGATGACACCAAAAGCATGATAAGCGTGCAGTCAGAGCGGCCGCGGAGGCACTCCATTGCTGGATCGATAGTTGGAGATGACGAAAGCCTTGCAAGCTCTCCATCTATTCCAAGTTACATGGTGCCAACTAAATCTGCGAAAGCCAAGTCCCGGATGCAAAGTCCATTAGCAGCAGAATACGGAACACCAGAAAAAGGGTCCTCCGGGACTGCAAAGAAACGTCTTTCTTTCCCAGCTTCGCCTGCTAGGCCAAGGAGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTCAATGCTGAAATCACTGTGGGAAATGGTGTGGCTGGTTGA 1425 0.4604 MGRKGNSWFSTVKKALSPEPKEKNDQNSSRSKKKWFQKQKLQTSESTSQSDNAPPLPLPEIILTHVESEINHDRVEVATAVDAEEPVLAVQTAAAEVQATTIVQFDNKPTEEMAAIRIQKAFRGYLARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTFAHLQTQIRSRRLRMLEENQALQKQLLQKHAKELESMRLGEEWDDSVQSKEQVEAKLLSKYEASMRRERAMAYSFSHQHNWKNASRSINPMFMDPTNPAWGWSWLERWTAARPWESHSQMEKEKNGNKSLRSSSRGITSAEISKAFAKFQLNSEKHSPTASQNPGSPNFESHSQSHSNPPKPPSPAVAKKLKKASPKDILAIDDDTKSMISVQSERPRRHSIAGSIVGDDESLASSPSIPSYMVPTKSAKAKSRMQSPLAAEYGTPEKGSSGTAKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNGVAG 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00466 474 MobiDBLite consensus disorder prediction 16 32 - -
Gma10g00466 474 MobiDBLite consensus disorder prediction 1 57 - -
Gma10g00466 474 MobiDBLite consensus disorder prediction 276 298 - -
Gma10g00466 474 MobiDBLite consensus disorder prediction 40 54 - -
Gma10g00466 474 Gene3D iswi atpase 108 135 - -
Gma10g00466 474 MobiDBLite consensus disorder prediction 315 339 - -
Gma10g00466 474 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 470 - -
Gma10g00466 474 MobiDBLite consensus disorder prediction 353 376 - -
Gma10g00466 474 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Gma10g00466 474 MobiDBLite consensus disorder prediction 315 474 - -
Gma10g00466 474 Pfam IQ calmodulin-binding motif 113 132 IPR000048 GO:0005515
Gma10g00466 474 SMART iq_5 110 132 IPR000048 GO:0005515
Gma10g00466 474 PANTHER IQ-DOMAIN 5-RELATED 5 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00466 Gma-Chr10 4541571 4545428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00466 1 473 IQD Protein Family AT5G03040 51.324 4.23e-141 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00466 - - gmx:100801847 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00466 10 4541571 4545428 Gma10g00466 10 4541571 4545428 ECH
Gma10g00466 10 4541571 4545428 Gma13g01176 13 25950346 25953573 GST
Gma19g01691 19 46215767 46220300 Gma10g00466 10 4541571 4545428 PCT
Gma03g01643 03 42556360 42560577 Gma10g00466 10 4541571 4545428 PCT
Gma10g00466 10 4541571 4545428 Gma19g01691 19 46215767 46220300 PCT
Gma10g00466 10 4541571 4545428 Gma03g01643 03 42556360 42560577 PCT