Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00459 ATGTCCGATGCTCCGGCGAGTCCATGCGGCGGCGGCGGCGGAGGCAGCCACGAGAGCGGCGAGCACAGTCCCCGCTCCAATTTCCGCGAGCAGGACCGCTTCCTCCCCATCGCCAACATCAGCCGCATCATGAAGAAAGCGCTTCCTCCCAACGGGAAAATCGCCAAGGACGCCAAGGAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGAAGCGAGCGATAAGTTTACCTCGCCGCTTACAGAGAGGGTGATTCAAAGGGTTCGGCCAAGGGTGGAGATGCATCTGCTAAGAGAGATGTTTATCAGAGTCCTAATGGCCAGGTTGAGAATGTTGCTCATCAAGGTTCTTTCTCACAAGGTGTTAATTATACGAATTCTTAGCCCCAGGCTCAACATATGA 417 0.5516 MSDAPASPCGGGGGGSHESGEHSPRSNFREQDRFLPIANISRIMKKALPPNGKIAKDAKETVQECVSEFISFVTSEASDKFTSPLTERVIQRVRPRVEMHLLREMFIRVLMARLRMLLIKVLSHKVLIIRILSPRLNI 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00459 138 MobiDBLite consensus disorder prediction 1 32 - -
Gma10g00459 138 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 34 82 IPR003958 -
Gma10g00459 138 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 81 IPR027113 GO:0001228|GO:0006355|GO:0016602
Gma10g00459 138 Gene3D Histone, subunit A 21 84 IPR009072 GO:0046982
Gma10g00459 138 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 1 81 - -
Gma10g00459 138 SUPERFAMILY Histone-fold 17 79 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00459 Gma-Chr10 4460617 4463102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00459 1 80 CCAAT-HAP3 Transcription Factor Family AT2G38880 73.750 7.92e-35 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma10g00459 CBFD_NFYB_HMF 1.5e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00459 K08065 - gmx:100791435 149.058