Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00455 atgAACTCCACCACCAACACTTCGAATTCTCAGTCAATGGCTGCAGCAGCACCGAGTGATGGTTCTGGGAAGAAGGTAAGAAAGCCTTACACCATAACCAAGTCCAGAGAGAGTTGGACTGAGGAAGAACATGATAAGTTTCTCGAAGCTCTCCAACTatttgacagggactggaagaaaattgaagattttgtaggttcaaaaacagttattcagattcgaagccatgcccagaaatacttcttgaaagttcaaaagaatgggactgtggcacatgtgcctcctccccgtccaaagcgcaaagctgctcatccttacccgcaaaaggcatcaaaaaatgttttggtgccactaccagcttccattggttatgcttcatcgagaaatacgcttgcacctgggtttgcctcatgggatgaaacttccctgctgatgaatgctggagccgataaacccatgacctgtcaggatgaactcaacaatcttcatcatggaaatgaaggcatgcatactccttttgtttctgatattggatcaaaggggatagcacagattaccaacagcagtctcagtggtgtaggaaattctactggagcactaccgacttctgagatacccaagcaagggaaacaagctccagtgcttcatgGTTTGCCAGATTTTGCTGAAGTTTACAGTTTCATTGGAAGTGTATTTGATCCAGAAACAAACGACCATGTCCAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGACTTTGAACCCATCAAGAAGGTATTGTCAACATATGATGTCAATACCGTGGCAGTAGGAATTGATGTCAAGACAAATGATCTATCATGTCAAACCGCTTAA 906 0.1876 MNSTTNTSNSQSMAAAAPSDGSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLVPLPASIGYASSRNTLAPGFASWDETSLLMNAGADKPMTCQDELNNLHHGNEGMHTPFVSDIGSKGIAQITNSSLSGVGNSTGALPTSEIPKQGKQAPVLHGLPDFAEVYSFIGSVFDPETNDHVQKLKEMDPINFETVLLLMRNLTVNLSSPDFEPIKKVLSTYDVNTVAVGIDVKTNDLSCQTA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00455 301 ProSiteProfiles Myb-like domain profile. 31 81 IPR001005 -
Gma10g00455 301 Pfam Myb-like DNA-binding domain 36 81 IPR001005 -
Gma10g00455 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 85 IPR017930 -
Gma10g00455 301 PANTHER SWI/SNF COMPLEX-RELATED 3 292 - -
Gma10g00455 301 Gene3D - 39 86 - -
Gma10g00455 301 SMART sant 35 83 IPR001005 -
Gma10g00455 301 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 34 83 IPR006447 GO:0003677
Gma10g00455 301 ProSiteProfiles SANT domain profile. 34 87 IPR017884 -
Gma10g00455 301 PANTHER PROTEIN REVEILLE 8 3 292 - -
Gma10g00455 301 MobiDBLite consensus disorder prediction 1 17 - -
Gma10g00455 301 CDD SANT 38 81 IPR001005 -
Gma10g00455 301 MobiDBLite consensus disorder prediction 1 39 - -
Gma10g00455 301 SUPERFAMILY Homeodomain-like 30 86 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00455 Gma-Chr10 4404718 4409379 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma10g00455 Myb_DNA-binding 4.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00455 - - gsj:114372630 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00455 10 4404718 4409379 Gma13g01162 13 25812162 25819078 GST
Gma19g01682 19 46119271 46122790 Gma10g00455 10 4404718 4409379 PCT
Gma03g01635 03 42471119 42474233 Gma10g00455 10 4404718 4409379 PCT
Gma10g00455 10 4404718 4409379 Gma19g01682 19 46119271 46122790 PCT
Gma10g00455 10 4404718 4409379 Gma03g01635 03 42471119 42474233 PCT