Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00452 ATGGTGGCCGTAACCCGCCTCGCGAAGCGCGCGTCAACCTTCTCACCCCAGATGAGGAGGTGCCTGAGCTCCTCCGAAGTCAAATCCCACGCGCCGCCGCACGACGCCGCGTCCTTCCGCCCGTTTCCGCGGCGCGAAGATCTGAGCAAGCGGTGCGTGCAGTGGGCGTTCCTCGGCTGCCCCGGCGTCGGAAAAGGAACGTACGCTAGTCGCCTGTCCAACCTCCTCGGCGTCCCTCACATCGCCACCGGCGATCTCGTTCGCGACGAACTCGCCTCCTCTGACCCCCTTTCTTCCCAGCTATCAGAAATTGTAAAACAAGGTCAATTGGTGTCAGATGAAATTATTATACGTTTATTGTCAAAGAGACTTGTTGCTGGGGAAGCTAAAGGCGATCTGGGATTTATTCTTGATGGTTTTCCTCGAACAATTAAGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTAATCAATCTGAAGCTCCGAGAAGATGTTCTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAATCAGTGTGGGGGTAATTTTAATGTTGCTTCTATTAACATCAAGGCCGAGAATGGGAGCCCTGAAATTATTATGGCTCCACTTCTTCCTCCTGAGAATTGTATGTCAAAGCTCATTACTCGATCAGATGATACTGAATCAGTGGTCAAAGAAAGGCTTCGAATATACAATGAAATGACTCAGCCTGTGGAGGAATTTTACCGTTCGAGAGGAAAATTATTGGAGTTTAACCTGCCTGGAGGAATCCCGGAATCTTGGCCTAAGACAGAGAACCAAAGCAAGGGAACTTCTCTGCTAGTATTATTTTGGACCAATGATGATATTTTGCTTGCAAGATCCAAGAAAAACGAAATTCCCTCGAAAACTTGCACAATACTACCATCGACGTTTCCACAAAAGGCCAGAAACTTCCCAAGCGAGATCGCGCCACGTGTCCTTCCCCAAATCTTTGAAGATCCTCTCCTTCACGTTACTCGCCCTCCTTTTGATTTCATCCACGTGGACGCCGACGTGGAAATATCTTCCTCCAACGTGACACGTCAAGAACATTCCACGCCTCCACATCGTCCACGTCAGCAAACGAGGTCATCGCGTAATTTCAATCGTTTTCATAATGACTCCATAATGGCGATTAATGAAGTTTCTGAGCTGTGTGAGCGATTTAGCATAAATTACTGCTTTGACGTTTTGGATTTTCAGGTTGTCCAGATGAGTGTTGATGGCGACAGCAAAGAGCTGAAAGAACTGAATCAGCGCTTACGAGATGGGAAGAAGATTGCTGGTGGGGAGCATGGTTTATGCGAGGAAGTGAAATGTAATGGAATTGCTGAAGAAGTTAAGGTTGAACAGGGGGGGACTGTGGAGTCCTCCTCTGTCCAGCAGCATATACCACAGCCTCAAGGGGCAATAATTTGTTGGGAGAGGTTTTTGCATATTAGATCCCTTAAGGTCTTGCTTGTGGAGATTGATGACTCTACCCGTCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAACGGATTGCAAGCTTGGAAGATATTGGAGGATTTAACCAATCATATTGATCTTGTTTTAACTGAGGTGGCAATGCCTGGCTTATCAGGCATTGGACTTCTATACAAGATTATGGGCCACAAAACCCGCAAAAATATTCCAGTAGTTATGATGTCATCTCATGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTTAAACCCATACGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGAAGATGTCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGCACACAAACCCAGAAGTCTATAAAATCAAAGAGTCTTGAGAAGTCTGATAATAATTCTGGAAGCAATGACGAAGATGATAATGAAAGTATAGGCCTGAATAATGTGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCATGGACCAAACGTGCTGTAGAAGTTGATAGTCATAAACCAGTTTCCCAGTGGGATCAAATAGCTGAGTGCCCTGACAGTACCTGTGCTCAAGTTGTTCACTCCAATGCTGAAATGGGTGGGAACAAGGTGGTTCCTCTAGCTGCAAAGGATTGTGCAGAACAGAATGAACAACTTGTCAAAACTGCAGGTTCTCAACATAGCAATGCACCTGATGTCGGCCCCTCTAAATTCAGTGAGCAAATTAATAGAGGACAACTGGACCTTAATTGTGAAAATCAATCTAGCAAGCTAAGGTGCAAAGGTTTATCACTGTCTGATGCCATTACTAGTACTTGTGATTCTCAGATGCATAGTGGAGAATTTGAAGCCCTAAATAAAAAACCCAAGTCCTCAGATATTGAAAATAAAGGTACTAATAATGATGAAGAATTGCCATCTCTTGAGCTCAGTTTAAAGAGGCTTAGAGGAGTTGAAGATGCTGATATTACAATTCAGGATGACCGGAATGTTTTAAGACGTTCTGATCAGTCTGCTTTCTCAAGGTACAATGCAGCCTCTAACACTAAGAAATCTCCCACTGGATGTGTTGGAAGCAATTCTCCTTATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGATATTCAATCTCATTCTTGCGGCAATCCTCCTAACCAAAACTCAAATGGTGCTAGCAATAACATTGATATGGGTTCCACTACTAATAATGCTTATGCTAAATCTGCAGTTATGAGTGAGCCAGCAGGGGCATCAACAACAAAATGTTTGTACCAAACATCTGCTTTCCAGCCTGTAAAAAACAGCCTTGTTTGTACCTCTCAACAAGTTGTCTTAAATAATACTGAAGATATGTCGGCAACAATTCTGGCACCACCTAAACTAGACAGACATAAAGATTCTGCAGCTCTGGACTTCCATCTCCATTGTGAAAACCATAACTGTATTGCTGACAACATGAAGCATCAGCTGCCACCTGATCATGATGCTGAATCTATAAAGAAAATGGCTACTGCTGCTCCACATTGTGGATCATCAAACGTGGAAGAAGTGCTAGTTGAAGGTAATGTTGGAAACCACAGTATCAATAGAAGTGTTTCAGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACAGCAGTTAATGCTGGAGGGACAAACACGGAAAGCAACAATGGACTCACTGGGAATAGTGGCAGTGGTGATGCTAGTGGAAGTGGAAGTGCCAACAGAGTAGATCAAAACAAGACTTCTCAAAGGGAAGTGGCCTTAACTAAATTTCGCCAAAAGAGAAAAGAGAGAAGGGAGAGGTGCTTTCATAAAAAGGTTCGATATCAGAGCAGAAAGAGATTAGCTGAACAACGACCTCGATTTCGTGGACAATTTGTGCGACAGACCTCTAACGAAAATGCAAGTGAGGCAACAACAGATAGCTGA 3489 0.4394 MVAVTRLAKRASTFSPQMRRCLSSSEVKSHAPPHDAASFRPFPRREDLSKRCVQWAFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSDPLSSQLSEIVKQGQLVSDEIIIRLLSKRLVAGEAKGDLGFILDGFPRTIKQAEILEGVTDIDLVINLKLREDVLLEKCLGRRICNQCGGNFNVASINIKAENGSPEIIMAPLLPPENCMSKLITRSDDTESVVKERLRIYNEMTQPVEEFYRSRGKLLEFNLPGGIPESWPKTENQSKGTSLLVLFWTNDDILLARSKKNEIPSKTCTILPSTFPQKARNFPSEIAPRVLPQIFEDPLLHVTRPPFDFIHVDADVEISSSNVTRQEHSTPPHRPRQQTRSSRNFNRFHNDSIMAINEVSELCERFSINYCFDVLDFQVVQMSVDGDSKELKELNQRLRDGKKIAGGEHGLCEEVKCNGIAEEVKVEQGGTVESSSVQQHIPQPQGAIICWERFLHIRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSLEKSDNNSGSNDEDDNESIGLNNVDGSDNGSGTQSSWTKRAVEVDSHKPVSQWDQIAECPDSTCAQVVHSNAEMGGNKVVPLAAKDCAEQNEQLVKTAGSQHSNAPDVGPSKFSEQINRGQLDLNCENQSSKLRCKGLSLSDAITSTCDSQMHSGEFEALNKKPKSSDIENKGTNNDEELPSLELSLKRLRGVEDADITIQDDRNVLRRSDQSAFSRYNAASNTKKSPTGCVGSNSPYNNSLEVTKKDSSRDIQSHSCGNPPNQNSNGASNNIDMGSTTNNAYAKSAVMSEPAGASTTKCLYQTSAFQPVKNSLVCTSQQVVLNNTEDMSATILAPPKLDRHKDSAALDFHLHCENHNCIADNMKHQLPPDHDAESIKKMATAAPHCGSSNVEEVLVEGNVGNHSINRSVSGSNNGSNGQNGSSTAVNAGGTNTESNNGLTGNSGSGDASGSGSANRVDQNKTSQREVALTKFRQKRKERRERCFHKKVRYQSRKRLAEQRPRFRGQFVRQTSNENASEATTDS 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00452 1162 Gene3D - 493 657 - -
Gma10g00452 1162 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 442 1138 - -
Gma10g00452 1162 MobiDBLite consensus disorder prediction 1041 1162 - -
Gma10g00452 1162 MobiDBLite consensus disorder prediction 618 635 - -
Gma10g00452 1162 PRINTS Adenylate kinase signature 84 98 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma10g00452 1162 PRINTS Adenylate kinase signature 135 151 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma10g00452 1162 PRINTS Adenylate kinase signature 56 69 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma10g00452 1162 PRINTS Adenylate kinase signature 220 235 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma10g00452 1162 PRINTS Adenylate kinase signature 237 251 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma10g00452 1162 SUPERFAMILY CheY-like 492 618 IPR011006 -
Gma10g00452 1162 MobiDBLite consensus disorder prediction 797 818 - -
Gma10g00452 1162 MobiDBLite consensus disorder prediction 1114 1132 - -
Gma10g00452 1162 CDD ADK 54 256 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma10g00452 1162 ProSiteProfiles Response regulatory domain profile. 495 613 IPR001789 GO:0000160
Gma10g00452 1162 MobiDBLite consensus disorder prediction 892 915 - -
Gma10g00452 1162 Pfam Adenylate kinase 58 250 - -
Gma10g00452 1162 Hamap Adenylate kinase [adk]. 53 273 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma10g00452 1162 MobiDBLite consensus disorder prediction 1041 1106 - -
Gma10g00452 1162 ProSitePatterns Adenylate kinase signature. 135 146 IPR033690 -
Gma10g00452 1162 Gene3D - 43 280 IPR027417 -
Gma10g00452 1162 MobiDBLite consensus disorder prediction 853 882 - -
Gma10g00452 1162 MobiDBLite consensus disorder prediction 618 682 - -
Gma10g00452 1162 MobiDBLite consensus disorder prediction 1144 1162 - -
Gma10g00452 1162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 265 IPR027417 -
Gma10g00452 1162 MobiDBLite consensus disorder prediction 651 678 - -
Gma10g00452 1162 MobiDBLite consensus disorder prediction 853 915 - -
Gma10g00452 1162 ProSiteProfiles CCT domain profile. 1107 1149 IPR010402 GO:0005515
Gma10g00452 1162 SMART REC_2 494 609 IPR001789 GO:0000160
Gma10g00452 1162 CDD psREC_PRR 496 599 - -
Gma10g00452 1162 MobiDBLite consensus disorder prediction 355 380 - -
Gma10g00452 1162 TIGRFAM adk: adenylate kinase 55 270 IPR006259 GO:0004017|GO:0005524|GO:0016776
Gma10g00452 1162 Pfam CCT motif 1104 1149 IPR010402 GO:0005515
Gma10g00452 1162 Pfam Response regulator receiver domain 496 607 IPR001789 GO:0000160
Gma10g00452 1162 PANTHER TWO-COMPONENT RESPONSE REGULATOR 442 1138 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00452 Gma-Chr10 4356336 4376033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00452 570 1151 Response Regulator Gene Family AT5G02810 45.774 8.16e-109 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gma10g00452 ADK 9.1e-37 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00452 K12129 - gmx:100806454 1409.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00452 10 4356336 4376033 Gma13g01159 13 25775881 25779367 GST
Gma19g01677 19 46090530 46093427 Gma10g00452 10 4356336 4376033 PCT
Gma03g01630 03 42449844 42452001 Gma10g00452 10 4356336 4376033 PCT
Gma10g00452 10 4356336 4376033 Gma19g01677 19 46090530 46093427 PCT
Gma10g00452 10 4356336 4376033 Gma03g01630 03 42449844 42452001 PCT