Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00451 ATGGGTTGGATTCCCTGTTCTGGAAGTTCAAACAGTAAGAAGAAGTTGAAGAAGAAATTGGAGAAGATGGAAGCGCAGAACAGCCTCGTTGATCCGATCAAAGCCACCCCAGGGAAATTGAAGAGGAATTCATCCATGAATTCCAAAGAGTCCTCCAAAAATGGAAACCCTGAGCACATTGCTGCACAGACATTCTCATTCCGTGAATTGGCAACTGCAACTAGAAACTTCAAAGCCGAATGTCTTTTGGGTGAGGGAGGCTTTGGCAGAGTATACAAGGGGCGTTTGGAAAATATTAATCAGATTGTCGCAATTAAACAACTTGACCGAAATGGACTACAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTTCTTCACCACCCTAACCTTGTCAACCTGATTGGTTATTGTGCTGATGGGGATCAAAGGCTTTTAGTTTATGAATTTATGTCTTTAGGATCCTTGGAAGACCACTTACATGATATTTCTCCTGGCAAGAAAGAActtgactggaacacaaggatgaaaatagctgctggggctgcaagaggattggaatatttgcatgacaaagctaatcctcctgtcatataccgagatttaaagtgctccaacattttgcttggtgaaggatatcatccaaagttatctgattttggtctggccaaacttggtccagtgggggaaaacacccatgtatcaacaagggttatgggaacctatggatattgtgctccagagtatgcaatgaccgggcaactgactctgaaatcagatgtttatagctttggtgttgttcttctggaaataattactggaaggaaagcaattgacaattcaaaagctgcaggagagcagaatcttgttgcatggGCCAGACCATTGTTTAAAGATCGAAGAAAATTTTCGCAAATGGCTGATCCAATGCTCCAAGGTCAATATCCTTCAAGAGGACTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAGGCCAATATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGAGTTACCTTGCTTTGCAAAAATATGACCCAAATACACAGACAGTACAAAGCTCTCGCCTTGCTCCTGGTACTCCTCCAAGATCCAAGAGGGGATATTGA 1152 0.2908 MGWIPCSGSSNSKKKLKKKLEKMEAQNSLVDPIKATPGKLKRNSSMNSKESSKNGNPEHIAAQTFSFRELATATRNFKAECLLGEGGFGRVYKGRLENINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSLGSLEDHLHDISPGKKELDWNTRMKIAAGAARGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKAAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLALQKYDPNTQTVQSSRLAPGTPPRSKRGY 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00451 383 Gene3D Transferase(Phosphotransferase) domain 1 154 371 - -
Gma10g00451 383 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 381 - -
Gma10g00451 383 MobiDBLite consensus disorder prediction 40 58 - -
Gma10g00451 383 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00451 383 SUPERFAMILY Protein kinase-like (PK-like) 57 351 IPR011009 -
Gma10g00451 383 Pfam Protein tyrosine and serine/threonine kinase 80 349 IPR001245 GO:0004672|GO:0006468
Gma10g00451 383 MobiDBLite consensus disorder prediction 1 58 - -
Gma10g00451 383 PANTHER OS07G0668900 PROTEIN 1 381 - -
Gma10g00451 383 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Gma10g00451 383 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00451 383 Coils Coil 6 26 - -
Gma10g00451 383 CDD STKc_IRAK 83 351 - -
Gma10g00451 383 Gene3D Phosphorylase Kinase; domain 1 61 153 - -
Gma10g00451 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00451 Gma-Chr10 4343853 4347483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00451 11 354 Glycoside Hydrolase AT3G07070 64.841 2.83e-165 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma10g00451 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00451 - - gmx:100499648 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00451 10 4343853 4347483 Gma13g01157 13 25738506 25742398 GST
Gma19g01675 19 46064901 46068047 Gma10g00451 10 4343853 4347483 PCT
Gma03g01628 03 42429123 42432319 Gma10g00451 10 4343853 4347483 PCT
Gma10g00451 10 4343853 4347483 Gma19g01675 19 46064901 46068047 PCT
Gma10g00451 10 4343853 4347483 Gma03g01628 03 42429123 42432319 PCT