Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma10g00446 | ATGATGGTTAGATCGTGTTGGAAGCCAATTGCTGATGGTGATGAAGGAGATGGGAGTGGGAGAGTTGATGGTCTTCTATGGTACAAGGATTTGGGGAACCACCTTTATGGGGAATTCTCAATGGCTGTGGTTCAGGCCAATAGTTCATTAGAGGATCGAGGTGAACTTGAGTCTGGACCCTTGAGTTCTAATCACTTGGGTCCTCAAGGGACTTTTATAGGTGTTTATGATGGCCATGGTGGAAGTGAGGCTTCGCAGTTTGTCAGTGACAATCTCTTCTGCAATCTCAAAAGGCTTGCATCTGAAAACCAAGGCGTGTCAGAACATGTTATCAAAAGGGCTTACTCAGCAACAGAGGAGAGTTTTTTGTCTCTTGTGAAGAAACAGTGGCTAAGTAAGCCACAGATTGCATCCACTGGTACTTGTTGTTTGGTGGGGGTGATTTGCAATGGCATGATACATGTTGCAAATTCTGGAGATTCCCGGGTGGTGTTAGGAAGATTAGAGAGAGCAACAAGGGAAATAGAAGCTATACAGTTATCTACAGAACACAATGTTAACCAAGAATCGGTGAGAGATGAACTTCGGTCAAAGCACCCCTTTGATTCACAAATCGTGGTTTTGAGACAAAACGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCACGATCCATAGGGGATGCATATCTGAAGAAAGCAGAATTCAACAGGGATCCTCTACCAGCCAAGTATAGACTAGCAGAAACATTCTTCAGGCCAATTCTTAGTTGTGACCCATCAACATCATCCCACACACTCCACCCTGATGATCAATTTCTCATATTTGCTTCTGATGGCTTATGGGAGCATCTTACCAACCAAGAGGTTGTTAGCATAGTCAGCAACAATCCACCTAACGGAATTGCTAGAAGACTTGTGAAAGCTGCACTTAGAGAAGCAGCTAAGAAGTGTGAAATGAGACTTTCTGACCTCCAAAAGATTGAGCAAGGGATGAGGAGACACATCCATGATGACATAACAGTGATTGTGGTGTTTCTTAATCCAAAACTCACTGAGAACACCTCTCTCTGTGGTTCTCCTCTTTCAATCAAAGGAGGTGGGTCTGCCAATTCCTAG | 1116 | 0.44 | MMVRSCWKPIADGDEGDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANSSLEDRGELESGPLSSNHLGPQGTFIGVYDGHGGSEASQFVSDNLFCNLKRLASENQGVSEHVIKRAYSATEESFLSLVKKQWLSKPQIASTGTCCLVGVICNGMIHVANSGDSRVVLGRLERATREIEAIQLSTEHNVNQESVRDELRSKHPFDSQIVVLRQNVWRVKGLIQVSRSIGDAYLKKAEFNRDPLPAKYRLAETFFRPILSCDPSTSSHTLHPDDQFLIFASDGLWEHLTNQEVVSIVSNNPPNGIARRLVKAALREAAKKCEMRLSDLQKIEQGMRRHIHDDITVIVVFLNPKLTENTSLCGSPLSIKGGGSANS | 371 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma10g00446 | 371 | CDD | PP2Cc | 36 | 346 | IPR001932 | - | |
Gma10g00446 | 371 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 346 | IPR001932 | - | |
Gma10g00446 | 371 | Gene3D | - | 29 | 355 | IPR036457 | - | |
Gma10g00446 | 371 | Coils | Coil | 307 | 327 | - | - | |
Gma10g00446 | 371 | Pfam | Protein phosphatase 2C | 56 | 315 | IPR001932 | - | |
Gma10g00446 | 371 | SUPERFAMILY | PP2C-like | 64 | 347 | IPR036457 | - | |
Gma10g00446 | 371 | PANTHER | ALPHABET, ISOFORM E-RELATED | 3 | 369 | - | - | |
Gma10g00446 | 371 | PANTHER | SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN | 3 | 369 | - | - | |
Gma10g00446 | 371 | SMART | PP2C_4 | 32 | 344 | IPR001932 | - | |
Gma10g00446 | 371 | ProSitePatterns | PPM-type phosphatase domain signature. | 72 | 80 | IPR000222 | GO:0043169 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma10g00446 | Gma-Chr10 | 4293689 | 4296657 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma10g00446 | 2 | 367 | PP2C-type Phosphatase Gene Family | AT3G12620 | 63.957 | 2.14e-177 | 496 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma10g00446 | K01102 | - | gmx:100814123 | 743.421 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma10g00446 | 10 | 4293689 | 4296657 | Gma13g01152 | 13 | 25689611 | 25691391 | GST | |
Gma19g01668 | 19 | 46040936 | 46043957 | Gma10g00446 | 10 | 4293689 | 4296657 | PCT | |
Gma03g01623 | 03 | 42407919 | 42410017 | Gma10g00446 | 10 | 4293689 | 4296657 | PCT | |
Gma10g00446 | 10 | 4293689 | 4296657 | Gma19g01668 | 19 | 46040936 | 46043957 | PCT | |
Gma10g00446 | 10 | 4293689 | 4296657 | Gma03g01623 | 03 | 42407919 | 42410017 | PCT |