Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00432 ATGGGTAACGCTCATCATTCACAATGGCATCGCAAACACGGTAACTCCGTTCTTCCGCCCCATAAATACAATCCTCAGCCACCACCAACCACCTCCAATTCCAACATGCTTTCTCTTCCTTACACCCACGTCGACACCACTCTCCGCTCCCTCGCCGCCCAAGCCGAGGGCTTCGGTCGCTTCGCCATCGGCGGCCTCCACGGTCCCCTTCACCACGTCACATCTCTCGCAGATGATGGACCGGGGTCGCTGCGTGACGCGTGTCGCCGAAAAGAACCGCTGTGGATTGTGTTTGAGGTTTCCGGCACCATTCAACTCTCCTCCTACTTGAACGTGTCGTCTCACAAGACCATCGATGGTCGTGGCCAGAGGATCAAACTCAGCGGAAAAGGCTTGCGGCTGAAGGAATGCGAGCACGTGATAATTTGTAATCTGGAGTTCGAAGGAGGCAGAGGGCATGATGTTGACGCCATTCAGATCAAACCTAATTCCAAGCACATATGGATTGATCGTTGCACGCTTAGTGATTTTGATGATGGGCTCATAGATATCACCCGAGAAAGCACAGACATTACTATTTCAAGGTGTCACTTCTCCCAGCATGACAAAGCCATGCTCATTGGGGCTGATCCCTCGCATGTTGGAGATAGGTGCATGAGGGTGACCATACACCATTGTTTTTTCAATGGGACTCGACAGAGGCAACCTCGTGTTAGGTTCGCAAAAGTGCATCTGTACAACAATTATATCAGAAACTGGGGCATATATGCTGTTTGTGCTAGTGTGGAATCCCAGATATTCTCGCAACATAATATCTATGAAGCAGGACAGAAAAAGGTGACATTTAAGTACCTTACTGAGAAGGCAGCAGACAAGGAAGTGGGAGCAACTGGTACCATAATGTCTGAAGGAGACATATTCTTAAATGGTGCTAAAGCGGGATTAATGGCTGTGGATGTTTCATGCAACATGTTTCACCCCAGTGAACACTATCCCTCTTGGACAGTGGAAGCCCCTACAGATGATCTGAAACAGATTCTTCATCACTGCACTGGATGGCAATCTCTTGCTAGGCCAGCAGATCGAACACTATGA 1095 0.4913 MGNAHHSQWHRKHGNSVLPPHKYNPQPPPTTSNSNMLSLPYTHVDTTLRSLAAQAEGFGRFAIGGLHGPLHHVTSLADDGPGSLRDACRRKEPLWIVFEVSGTIQLSSYLNVSSHKTIDGRGQRIKLSGKGLRLKECEHVIICNLEFEGGRGHDVDAIQIKPNSKHIWIDRCTLSDFDDGLIDITRESTDITISRCHFSQHDKAMLIGADPSHVGDRCMRVTIHHCFFNGTRQRQPRVRFAKVHLYNNYIRNWGIYAVCASVESQIFSQHNIYEAGQKKVTFKYLTEKAADKEVGATGTIMSEGDIFLNGAKAGLMAVDVSCNMFHPSEHYPSWTVEAPTDDLKQILHHCTGWQSLARPADRTL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00432 364 PRINTS Pollen allergen Amb family signature 54 71 IPR018082 -
Gma10g00432 364 PRINTS Pollen allergen Amb family signature 234 253 IPR018082 -
Gma10g00432 364 PRINTS Pollen allergen Amb family signature 256 275 IPR018082 -
Gma10g00432 364 MobiDBLite consensus disorder prediction 1 20 - -
Gma10g00432 364 PANTHER PECTATE LYASE 33 358 - -
Gma10g00432 364 PANTHER PECTATE LYASE 18-RELATED 33 358 IPR045032 GO:0030570
Gma10g00432 364 Gene3D - 41 346 IPR012334 -
Gma10g00432 364 MobiDBLite consensus disorder prediction 1 17 - -
Gma10g00432 364 Pfam Pectate lyase 109 272 IPR002022 -
Gma10g00432 364 SUPERFAMILY Pectin lyase-like 54 360 IPR011050 -
Gma10g00432 364 SMART amb_all 81 279 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00432 Gma-Chr10 4152969 4155986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00432 76 361 Polysaccharide Lyase AT3G55140 76.224 1.92e-170 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00432 K01728 - gmx:100799009 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00432 10 4152969 4155986 Gma13g01140 13 25559645 25562587 GST