Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00427 ATGGACAAATCGCGCCACAGCAAGTCCAAGGCAGCACCCTGCTCCACCCACCAACCCCAACTACCTCTTCCTCAAGGGAACAAAGAGGTTCATAGACAGCGACAGCCTCTGAATCTGTTGTCTCCTGATTCTGGTTCATCCAGTGGTGGGGTTGCAGACAAGGATTCATTCTCATCTAAATTCGGGTGGAGATCTACGAAGCAGCTGTTTGGAACTCCGATTAAGAAGTTATTAGCTGAAGAGATGTCACCGAGAGCTGAATCCAAAAGAAGATCACCTGGTGTGATCGCCAAATTAATGGGGCTTGATGGGCTGCCGTTCCAGCAGCCTACCAATAAGCAGCATAATAAGGGTTTGTCTGTAAACCAACAGAAGACAGCACAATTAGAAAAAACACGCAGCAAAGGAGTGCTATATAGTGGTCAATCTTCTAGGGGATGCTCAAAGGATCAGCAAGAATTTAAGGATGTATTTGAGGTCTCGGAGATTCCAAAGGTAGAGAGCCCTAGGTATCCATCACAGGGGTGTGCAGACTTGATGAGCACTGATGCTGAAATTTCATTCATTGAACAGAAGTTCATGGATGCCAAACGACTTGCAACTCATCAAGATTTACAGTCTTCAAAGGATTTCTGTGACACACTCGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAATACTTTAAGCGGCCAGATTCTTTGTTTAAAAAGCATCTAAATGATCTTCAAGCTGCTCCTATCCAATCACATTATGGTCATGTAGAAGCTATGGATATTGAGAAGTATGATCATGACTTCAATTTGATGTCAGATGGGGAGAAAACACGGTTGAACTACAATAGATCATCTCATGAGAAGCATCATGATGGTTATCCTTGTGATCTTGACAAAAGACATGTGATGCATATTTCACCAAAATCATCAAAGCTTCTATTTAAGGGTACATATGAGCAAAAGGCAGTCACCTCGCAGATTGTCCTCTTGAAACCTAATCTTGGAAAAGTGCAGAATGGTACCAGAATTGTGTCATCACCTTGTTCTTCACACAATTTTCTGTCAGGGCGTGAAAATGACACTGAACTGTGTCAACCGACAAATTTGCCTGAAAGTGCCATGTCTTGGAGGCAGGATTCTTTTGAATCTAGAGAAATTGCAAAGGAAGTCACTAGGCAAATGAAAATTAGTCTTCACAGTGGTGGCATGAAGCTTTCCACCTCTAGAATTAGAGGATATGCTGGGGATGATAGTTCATGTAGTGTTTCTGGGAATGAATCTCCTGAGGAGTCTGAGGAAACAACTGCAACTTTGGGAAATTCGATTGACTTAAACAACCGTAGCAGGCGATCATCCCGATCTAGTGAATCTTCTGTCAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGACACATAAGTCTCAAGAGCTGCAAGGCATCAGCAGGAGCAACACACTGGCTGAAATGCTTGCCGTCCCTGACAAGGTATTGAAGGCTGCTAATTCATACAGCATGGCTAGTGGGGAAGGTTTCCATGATAAATTTACTCCCAATAGTCAACCTTCTAAGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGACGGATGCATTGGTAGTCTGTCGAGGTCAAAATCCCTTCCTTCTTCATCTGCTGCTTTTGGAAGTCCTAGAAGATTCATGCGCACTGAAGCACTTCTTGATGAGCGATTTATGGTGCCAAAGGAAGCTCACAGATGTGAGAGGAGAAGATCTGGTCACAAGAAGTCTAGGTCTTTGCATTCATCAATTCCCAATAAATTGAAAATCAGTCTCAAAGATTCTCCCAAGCTTGAGGTTCTAGCTAGTGAATCTTTATCTGAGATTGTAAGAGATGCGGTTGATGATGATGTGACAAGTGAAAGTAAAGTTGGGTCTGAACCTTCTACTAAGGTGCTTCCTGAATCATCTTCTCACCTTTTGACAAAAGACAACAGTAGTGCAGACCTAGACAATTCAATACACCAGGATCTATCAGCTGGGTCATCTGGTGGAAGTTCAGTCCTCAATGAACCTCCCGTTCGTGTTCCTGGACTTGAAGCTTCTTGCTGTAAAGATGCTGATCAGCCCAGTCCTGTCTCAGTCCTGGAGTCTTCTTTTACAGATGATGTGTCATCTTGTTCTGATTGTTTTGAAAGTTTGAACAATGACCTACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGATGAATATGTGGAGGGGCCCATGGTAGTAAGTGATGAAGATGGTGGGGAAGCATCTACTGGAATGCTAGAAGACAAAGGATTACGTAGGACTGAAGATAGCTGGGAGTGTTCCTACATTATTGATGTCTTGTCTGAATCTGGCATCGATGGAGCTCAGCCAGATACAATTTTGGAACTTTGGCATTCCCTAGAATGCCCTGTGAGTCTTTCTGTTTTTGATGAGCTTGAAAAGAGGTATGGTGATTGGACTACTTGCTCAAGGTCTCAAAGGAGATTGCTTTTTGACCGTATTAATTTGGGAATTGTCAAGATCAATGAGCAATGCACTCATGCACTACCATGGGTGGGTCCAGTGACCGCAAATGTTATTGGTTCTAATTTGAACAAGAACGGGTTTCGAGATGGCCTTCTGAGGATGTTAGTGAGAGAAGGAAAAGTGAAGGGTGATGCTCTGGGGAAGGTGCTGGTTATGGAATCAGAGTGGCTGGACTTGAGAGATGACATTGATGTCGTAGGCAGGGAAGTTGAGAGAATGTTGTTAGATGATTTAGTGTCAGAGATAATCGGTACTTAG 2826 0.4338 MDKSRHSKSKAAPCSTHQPQLPLPQGNKEVHRQRQPLNLLSPDSGSSSGGVADKDSFSSKFGWRSTKQLFGTPIKKLLAEEMSPRAESKRRSPGVIAKLMGLDGLPFQQPTNKQHNKGLSVNQQKTAQLEKTRSKGVLYSGQSSRGCSKDQQEFKDVFEVSEIPKVESPRYPSQGCADLMSTDAEISFIEQKFMDAKRLATHQDLQSSKDFCDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQAAPIQSHYGHVEAMDIEKYDHDFNLMSDGEKTRLNYNRSSHEKHHDGYPCDLDKRHVMHISPKSSKLLFKGTYEQKAVTSQIVLLKPNLGKVQNGTRIVSSPCSSHNFLSGRENDTELCQPTNLPESAMSWRQDSFESREIAKEVTRQMKISLHSGGMKLSTSRIRGYAGDDSSCSVSGNESPEESEETTATLGNSIDLNNRSRRSSRSSESSVSREAKKRLSERWKMTHKSQELQGISRSNTLAEMLAVPDKVLKAANSYSMASGEGFHDKFTPNSQPSKWVEPLGISSRDGWKDGCIGSLSRSKSLPSSSAAFGSPRRFMRTEALLDERFMVPKEAHRCERRRSGHKKSRSLHSSIPNKLKISLKDSPKLEVLASESLSEIVRDAVDDDVTSESKVGSEPSTKVLPESSSHLLTKDNSSADLDNSIHQDLSAGSSGGSSVLNEPPVRVPGLEASCCKDADQPSPVSVLESSFTDDVSSCSDCFESLNNDLQGLRMQLQLLKLESDEYVEGPMVVSDEDGGEASTGMLEDKGLRRTEDSWECSYIIDVLSESGIDGAQPDTILELWHSLECPVSLSVFDELEKRYGDWTTCSRSQRRLLFDRINLGIVKINEQCTHALPWVGPVTANVIGSNLNKNGFRDGLLRMLVREGKVKGDALGKVLVMESEWLDLRDDIDVVGREVERMLLDDLVSEIIGT 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00427 941 Coils Coil 729 749 - -
Gma10g00427 941 MobiDBLite consensus disorder prediction 641 687 - -
Gma10g00427 941 Pfam DUF761-associated sequence motif 88 107 IPR032795 -
Gma10g00427 941 MobiDBLite consensus disorder prediction 634 690 - -
Gma10g00427 941 MobiDBLite consensus disorder prediction 106 144 - -
Gma10g00427 941 Pfam Domain of unknown function (DUF4378) 787 937 IPR025486 -
Gma10g00427 941 MobiDBLite consensus disorder prediction 413 452 - -
Gma10g00427 941 MobiDBLite consensus disorder prediction 582 606 - -
Gma10g00427 941 PANTHER AFADIN 25 939 - -
Gma10g00427 941 MobiDBLite consensus disorder prediction 586 600 - -
Gma10g00427 941 Pfam Protein of unknown function (DUF3741) 190 234 IPR022212 -
Gma10g00427 941 MobiDBLite consensus disorder prediction 1 58 - -
Gma10g00427 941 MobiDBLite consensus disorder prediction 453 472 - -
Gma10g00427 941 PANTHER AFADIN 25 939 - -
Gma10g00427 941 MobiDBLite consensus disorder prediction 31 58 - -
Gma10g00427 941 MobiDBLite consensus disorder prediction 107 144 - -
Gma10g00427 941 MobiDBLite consensus disorder prediction 413 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00427 Gma-Chr10 4104849 4110578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00427 67 939 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.957 1.54e-139 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00427 - - gmx:100797413 1808.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00427 10 4104849 4110578 Gma13g01134 13 25495579 25501082 GST
Gma19g01651 19 45892871 45895852 Gma10g00427 10 4104849 4110578 PCT
Gma03g01605 03 42260406 42265505 Gma10g00427 10 4104849 4110578 PCT
Gma10g00427 10 4104849 4110578 Gma19g01651 19 45892871 45895852 PCT
Gma10g00427 10 4104849 4110578 Gma03g01605 03 42260406 42265505 PCT