Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00422 ATGAAGAGACAGAGAGATGGAGTAGAGAGCATAGATTTAGTAAATTGTCTAATGTTGCTCTCTCATCACAGAGAAATCAAACCCCAAAAACTTTTGGGCCCTGAAGAATTTGAGTGTATGACATGCAACCGGAAGTTCACTTCGTTTCAGGCCCTCGGAGGCCATAGGGCAAGCCACAAAAAGCCCAAATTACACGTAAAAGAACAGGGCAAAATTCTGATGTTGGGGAATAAGCCCAAAAAACACGAATGCACCATTTGTGGTAGGGAATTCACTTTGGGCCAGGCACTTGGAGGACACATGAAAAAACACAGAATTGCCGTTGACCAAGGGTTTTCTTTGATAAACGAGGTTGTTGTAAAAGTACCGTTTCTTAAAAGGTCTAATAGTAAGAGGGTTTTGTTCTTGGACTTGAACTTGAACTTGACACCTCTGCAGAATGACTTGAAGTTATTATTTGGAGAAAAGGCACCCAAAGTTGATTCCTTCGTTTGA 495 0.4141 MKRQRDGVESIDLVNCLMLLSHHREIKPQKLLGPEEFECMTCNRKFTSFQALGGHRASHKKPKLHVKEQGKILMLGNKPKKHECTICGREFTLGQALGGHMKKHRIAVDQGFSLINEVVVKVPFLKRSNSKRVLFLDLNLNLTPLQNDLKLLFGEKAPKVDSFV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00422 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 104 IPR013087 -
Gma10g00422 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Gma10g00422 164 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 159 - -
Gma10g00422 164 PANTHER ZINC FINGER PROTEIN ZAT5 1 159 - -
Gma10g00422 164 Pfam C2H2-type zinc finger 37 62 - -
Gma10g00422 164 Pfam C2H2-type zinc finger 82 106 - -
Gma10g00422 164 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Gma10g00422 164 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Gma10g00422 164 Gene3D Classic Zinc Finger 34 104 - -
Gma10g00422 164 SUPERFAMILY beta-beta-alpha zinc fingers 37 104 IPR036236 -
Gma10g00422 164 SMART c2h2final6 37 59 IPR013087 -
Gma10g00422 164 SMART c2h2final6 82 104 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00422 Gma-Chr10 4068607 4069312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00422 1 161 C2H2 Transcription Factor Family AT2G37430 48.295 4.04e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma10g00422 zf-C2H2_6 4.8e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00422 - - gmx:100795828 324.709