Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00420 ATGTCTTTCCACAATCGAGCATTTTGGATGGGGAAGAGTCCTGAGGGTTTGAATGATGGTGACATGACAAAGGATTCTTCTAGAATTGAGTCCAAGCGTGCTCATCAGTGGTTCATGGATGACCCTGAAGTGGATATGTTTCCCAATAAGAAACAAGCCGTAGAGGCTCCGAACAATTTGTTATCTGGAATGCTCAACTCCAATATTTCTTTGTGGGGAAATTCCTCAGGATTTCACTCTTTAAATGGTCATTTTACTGAACAGTTATTTGCCCCAGATGCAGCAACTATGAGTTTTGAAGACACAAACACCCCCTCTGTTAGCATAGATGATAAGTTGAGTGTGGAAAGAAAGGATAACGTGGATCGCTTTGGGAGTGAGTCCTCTTTTGGTTTATCCATCTCAACTGCATTAGAAGATCCTCATTTAGTTTTTAATTATGATGGAATTAGAAAAGTCAAATTTAACGAGGTGAAGGAATCTGAGAATGTCATGCCTGTTACTACAAATAATCCCTATGATAGGGGTGTTAGTGACAGTGTCTCAAATCCTTGTCTATACAAGGAGGAGGATAATTCCATATCAACGAGTCATGCCTACAATGAAGAGGTTGCCAATATAATAACAATGGATGGCACATATGACAGGACAGATAACAATTTCATGCCAATGAGTCAATCCTTTAACAAGGGAAATGACAGCTTATCTATACATCCAACGTTCAATGAGATTTGTAATACGATATCAATGGATCTTGGTTTCAGTAAGCAGGGAAATGATGTGCCATTTGTTTCACATTCCTATAATAATGGAGAGAGCACTATCATATCCTTTGGTGGCTGTGACGATGATACAACTCCCTCTGACTTATTCATTTCTGACTATGATCTGTTGATGTGTGAAGCACTTTCACATAAGTCAGAAGCTGTGAATGTGAAAGAGTTGGCTAGATCTAGTTCAAATTTACTTCCAAGTACAGCTCAGACATCTGCACCTGAAACTGAAAATGTTCCCAAGTCAAAAGGGGAGATAAAAATGTCTAGAAAAGCAACTTCAAACAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGTCTCTCAGTAAAGTATAAGGCATGGTCACGGGAGAAGGAACTCCGAGGTGTTATAAAAGGTGCTGGCTATTTGTGCAGTTGTCACTCATGTAATTTTTCCAAGGTTATTAATGCATTTGAATTTGAGCGACATGCTGGTTGCAAGACAAAACACCCCAATAATCACATTTACTTTGATAATGGGAAAACTATATATGGGGTTGTACAAGAGCTCAGGAGCACTCCGCAGAGCATGTTGTTTGAAGTTATTCAGACTATAACTGGTTCACCTATCGATCAGAAATCCTTCTGCATTTGGAAAGAATCTTTTTTGGCTACAGCAGGGAACTCCAACGCATATGTGCAAAACAAGAAGTAA 1467 0.394 MSFHNRAFWMGKSPEGLNDGDMTKDSSRIESKRAHQWFMDDPEVDMFPNKKQAVEAPNNLLSGMLNSNISLWGNSSGFHSLNGHFTEQLFAPDAATMSFEDTNTPSVSIDDKLSVERKDNVDRFGSESSFGLSISTALEDPHLVFNYDGIRKVKFNEVKESENVMPVTTNNPYDRGVSDSVSNPCLYKEEDNSISTSHAYNEEVANIITMDGTYDRTDNNFMPMSQSFNKGNDSLSIHPTFNEICNTISMDLGFSKQGNDVPFVSHSYNNGESTIISFGGCDDDTTPSDLFISDYDLLMCEALSHKSEAVNVKELARSSSNLLPSTAQTSAPETENVPKSKGEIKMSRKATSNNFPSNVRSLLSTGMLDGLSVKYKAWSREKELRGVIKGAGYLCSCHSCNFSKVINAFEFERHAGCKTKHPNNHIYFDNGKTIYGVVQELRSTPQSMLFEVIQTITGSPIDQKSFCIWKESFLATAGNSNAYVQNKK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00420 488 PANTHER AUTOIMMUNE REGULATOR 5 487 - -
Gma10g00420 488 Pfam Tify domain binding domain 386 441 IPR032308 -
Gma10g00420 488 MobiDBLite consensus disorder prediction 321 336 - -
Gma10g00420 488 MobiDBLite consensus disorder prediction 321 352 - -
Gma10g00420 488 PANTHER PROTEIN, PUTATIVE-RELATED 5 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00420 Gma-Chr10 4034829 4037711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00420 336 473 PHD Transcription Factor Family AT3G53680 54.348 1.54e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00420 - - gmx:100794765 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00420 10 4034829 4037711 Gma13g01127 13 25411815 25414939 GST