Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00419 ATGGAGACACAAAATTGGTTCGAGAGATTGAAGCCTTTCGCAGCTGTGGTATCAATACAGTTTGGATATGCAGCTATGGATGTTCTATCAAAGGCTGCAATGAACAAAGGGATGAGCAATTATGTGTTTGTTGTTTATCGCCATGCTGTTGCATTCTTTGTTATGGCCCCTTTGGCATGGTTTTTTGACAAGAAAGTAAGGCCAAAGATGACATTGTCAATTTTCATGAAGATAGCGGTGCTCAGCTGGATAGAGCCAGTTATTGACCAGAATTTGTATTTTTTGGGGATGAAGTACACAACAGCAACCTTTGCCGTTACCATAACCAATATGCTTCCTGCCATTACCTTTATCTTCGCATGCATTCTTAGGCTTGAGAAGATTAAAATAAGAAGTATACGGAGCCAAGCAAAGGTGGTGGGAACCCTAACAACTGTTTCGGGAGCCATGGTCATGACACTCCTGAAAGGGCCAGTACTTTTCGGGTCACACGGAAGCAATGATCACAGCCAGCATAATGGGACAAGTATGCGACATACAATAACAGGATTCATATTGATCACAATTGGATGCTTTTGTTGGGCTTGTTTCGTGATCCTACAAGCTACTACCCTTAAAACCTACCCTGCTGAACTCTCTCTTTCTGCTTGGATATGCTTAATGGGCACAATTGAAGGTGCCGCAGTGGCTATGATTATGGAAAGGGGCAACCCTTCAGTTTGGTCTCTAAAATTGGACATGAAACTGCTATGTGCTGTCTACTCTGGTATAGTGTGCTCAGGAATGAGCTATTACTTGCAAGGAGTAGTGATGAAAACTAGAGGCCCAGTCTTCGTAACAGCATTTAGTCCCCTCAGCATGGTAATCGTGGCTGTCATGAGCTACTTCATTCTGGCCGAACAAGTGTTCCTTGGAAGGGTGATCGGTGCCGTTATCATTTGTTTGGGCCTATATGCTGTGGTGTGGGGCAAAAGCAAAGATTGTAGCCCACGAAGCCCAAATACTCAAGAGCCCATATTACTGGCAAAGCAAATAGTAAATGAGGACAATGCTAAGAAGGAAAATTGCAATTGCACTCACGAAGTCATCAACGCCAACAATTTTGAAAATGGAATCACTAGAAACGAAGAACAAGTGTGA 1140 0.4316 METQNWFERLKPFAAVVSIQFGYAAMDVLSKAAMNKGMSNYVFVVYRHAVAFFVMAPLAWFFDKKVRPKMTLSIFMKIAVLSWIEPVIDQNLYFLGMKYTTATFAVTITNMLPAITFIFACILRLEKIKIRSIRSQAKVVGTLTTVSGAMVMTLLKGPVLFGSHGSNDHSQHNGTSMRHTITGFILITIGCFCWACFVILQATTLKTYPAELSLSAWICLMGTIEGAAVAMIMERGNPSVWSLKLDMKLLCAVYSGIVCSGMSYYLQGVVMKTRGPVFVTAFSPLSMVIVAVMSYFILAEQVFLGRVIGAVIICLGLYAVVWGKSKDCSPRSPNTQEPILLAKQIVNEDNAKKENCNCTHEVINANNFENGITRNEEQV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00419 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 150 - -
Gma10g00419 379 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Gma10g00419 379 Pfam EamA-like transporter family 21 133 IPR000620 GO:0016020|GO:0016021
Gma10g00419 379 PANTHER WAT1-RELATED PROTEIN 8 346 - -
Gma10g00419 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Gma10g00419 379 PANTHER WAT1-RELATED PROTEIN 8 346 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00419 Gma-Chr10 4029808 4034166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00419 1 378 Nodulin-like Gene Family AT2G37460 59.737 2.22e-160 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00419 - - gmx:100813408 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00419 10 4029808 4034166 Gma13g01126 13 25407044 25411537 GST
Gma19g01642 19 45809888 45813248 Gma10g00419 10 4029808 4034166 PCT
Gma03g01594 03 42180173 42183081 Gma10g00419 10 4029808 4034166 PCT
Gma10g00419 10 4029808 4034166 Gma19g01642 19 45809888 45813248 PCT
Gma10g00419 10 4029808 4034166 Gma03g01594 03 42180173 42183081 PCT