Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00407 ATGTTGCCAGACACCGACGCACGAGTACGTTGTTCCGAGATCGATTCCGATGGCTGGACCCTCTCCTTTGCCGGCCATGATGCTGCGTTTCTTTTCGTTTGTGGTGTCGGCGAGTCAACAACGAAGAGAGATCTGAGAGAGACAAGTTGGCAATGGCGGCTGGGTTTCGAGATTGAGTGCAGAGAGAGAGTACGGGAAAGGAAAAgGGATGAGGCAATGCGCGTGTTTGTTTCTGCTGCTGTTATCAAAAGATATGACGTGTTTTCTCTCGAGACTGCAGACGGGATATGCGTCATGATCAGTGGATTCATCAATGAGCAGCGCACTCTCGAAAATGGTTTTGCCGCTGAGGTTTTCAACCGTTTTTTATTTGGCTTTCCTCCAGACTGGGAAAGCTATGCTCTAGATTGCTTCAGAGAAGAATCTACCACTGGCACTGATTTAGGTAGTGCTGTTCCTGATAATGTACCAGCTAGTTCTCTAGAAATTTTATCTGATGGCGTGGAAAATTCCATTCCTACTTCTTTGGCATCACCAAAGGAGGCCCCGGGAGATCACGAGAAGTCATTCCCTGGAAATGAATGCAATGTGTCAAAGGAGATGGGTGGGGTTAATGTTGCTTGTAGTAGTGGTGGGAAAAGACGTAGTGCCAGGTTGCATGATATTAAAGTACACCAGCAGAAGAAGAAGCCTGCTTCTGGAGGGTCTCTGAAGAATCCAAATAATGAGAACTCTACGTTAGTGGCCTTAGAGAATTGTGATGTAGAGGGACTGAAAAGTCCGGTGACACCCATTCAGTCACAATCATCAAGACAACTAAGCACATCATCTGGGCAGCTAGTTAAAAAATCTGCATCCAGAATTTCTAGAACATTGTCACCAAAGACTGAAGGCTGTTATAAGAAAAAGAGAGTGACAGTTGAAAGAAAAGTGGGCAGGCCTAAGGGAAAACTAAATAAATCTGCATCTGCTGTGAAAAATCCGCAAGAAAAGGATCTAAGCCACTTGACCAAGGGAAGCCAACAGAAAATATCCACAGTTACTCCAGAGTCGCCGAGTTTCAGAAAATCCAGATCCGGTAGGTTGCTTCTACCTCCCTTAGAGTTTTGGCGCAATCAAATACCAATTTATAATGCGGACCACGAGATTACAGAAATTCAGGATGGTGCATCTCTGATATCACCTTGTAAAGGTTTTTCGCCATCATTGAGTAGGTTTAGCAATCAGAAACGTGGAGCGTGA 1242 0.4501 MLPDTDARVRCSEIDSDGWTLSFAGHDAAFLFVCGVGESTTKRDLRETSWQWRLGFEIECRERVRERKRDEAMRVFVSAAVIKRYDVFSLETADGICVMISGFINEQRTLENGFAAEVFNRFLFGFPPDWESYALDCFREESTTGTDLGSAVPDNVPASSLEILSDGVENSIPTSLASPKEAPGDHEKSFPGNECNVSKEMGGVNVACSSGGKRRSARLHDIKVHQQKKKPASGGSLKNPNNENSTLVALENCDVEGLKSPVTPIQSQSSRQLSTSSGQLVKKSASRISRTLSPKTEGCYKKKRVTVERKVGRPKGKLNKSASAVKNPQEKDLSHLTKGSQQKISTVTPESPSFRKSRSGRLLLPPLEFWRNQIPIYNADHEITEIQDGASLISPCKGFSPSLSRFSNQKRGA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00407 413 MobiDBLite consensus disorder prediction 261 293 - -
Gma10g00407 413 MobiDBLite consensus disorder prediction 296 315 - -
Gma10g00407 413 MobiDBLite consensus disorder prediction 260 358 - -
Gma10g00407 413 Pfam SANTA (SANT Associated) 67 133 IPR015216 -
Gma10g00407 413 PANTHER MIS18-BINDING PROTEIN 1 70 405 IPR039110 -
Gma10g00407 413 MobiDBLite consensus disorder prediction 223 244 - -
Gma10g00407 413 PANTHER MIS18-BINDING PROTEIN 1 70 405 - -
Gma10g00407 413 MobiDBLite consensus disorder prediction 338 355 - -
Gma10g00407 413 MobiDBLite consensus disorder prediction 172 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00407 Gma-Chr10 3931889 3939348 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma10g00407 SANTA 7.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00407 - - gmx:100793717 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00407 10 3931889 3939348 Gma10g00407 10 3931889 3939348 ECH
Gma10g00407 10 3931889 3939348 Gma13g01111 13 25287715 25292605 GST