Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00406 ATGACAGTCTTGATCCCCAGGAACACTATACAATCCCAACAAAGAAAGAGCAGGGTTTACAAAGGTGAGAGAACAAGGACTGGAGATAACAACTTGCTGGCCAAATATGAACTCTCAGGCATTCCTCCTGCTCCCAGGGGTGTTCCTCAAATCACAGTGTGCTCCGACATTGATGGCAATGATATCTTGAATGTCTCTGCTGATGATAAAACTACCGAACAAGATCACCATTACCAACGACAAGGGTAG 249 0.4498 MTVLIPRNTIQSQQRKSRVYKGERTRTGDNNLLAKYELSGIPPAPRGVPQITVCSDIDGNDILNVSADDKTTEQDHHYQRQG 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00406 82 Pfam Hsp70 protein 14 78 IPR013126 GO:0005524|GO:0140662
Gma10g00406 82 MobiDBLite consensus disorder prediction 1 26 - -
Gma10g00406 82 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 18 76 - -
Gma10g00406 82 MobiDBLite consensus disorder prediction 1 16 - -
Gma10g00406 82 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 81 IPR029047 -
Gma10g00406 82 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 75 IPR029047 -
Gma10g00406 82 PANTHER HEAT SHOCK PROTEIN 70KDA 18 76 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00406 Gma-Chr10 3931481 3931729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00406 1 74 Calmodulin-binding Proteins AT3G12580 62.500 4.50e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00406 K03283 - gsj:114370253 136.732