Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00395 ATGCAGATGCTCATAGACAAAGAAATGTCCAAACAAAAAGACTCAAAGCACAACCTACCAAATGTAGTAGCAAAGCTAATGGGGCTTGAAGCCCTTCCAAAGGGAGAGCCTAATTTATCAATGGAAAGAAGTCACAGGAGAGACTATTCTCAACAAATGTATGGTCCTATAGGCTTACCATTCAAGCATTGGCAGCAGGAAGATAGGTTTATGGATAGGGAAATGCTTCATGAAGTTCATCCAAGCACAGAACATGTTGCTGACAAAGATATGTATGAAATATGGCAGCAAACTCAGAGAGGAAGGTTTAGTGAAGATGTTGATGGGAAAAGAATGGCTCTAATTCGTCAGAAATTCATGGAAGCGAAACGTCTGTCAACAGATGAGAGAATGCGCCAATCCGAGCAATTCAAAGATGCATTGGAAGTTCTAAGCTCCAATAGTGATCTCTTGATCAAGTTATTGGATTCTCAAAATGTTTGTGATTTATACTCAACTTCACCTAATGAGACAAAGCGCATTACTCTTATTAAACCTTTGAAGATGGTTGACAATGACAAATGTGCCAGAAAGGAGAAAAAGAACAATAGACTGATTAAGAAACCATCAAGTGTTGATCAAGAAAATCCTGGAAACTCTCCAGATAATCAGAAAGTTGATGAATCTCCGGTCCTAACCACTCGAATAGTGTTGCTAAAGCCTAGCCCTTGGAGGACACCTGAGCAAAAGGCTGTGGTTTCTCCAACAACATCATCATCGCCATTGAATCTGAAAAGTGGAAATTTCCATCAGGGACCTGAATATGATGATGTACTAGAATCCATTAGAGTGGCAAATGAGGTCACACAGCAAATGCATAAAGGCCTGAGGAGCTATCAGAAGGATAAAACTTCATACTCTTCAGTGTTTTCCAATGGCTATTCTGATGATGAGAGTTCATTCAACAAATCATATCACGAGTATGCATCCGCGAATTTCAGCGATTTAGAAGCCACGTCAATGTCACCATTGCCAAGGCTTTCATGGGATTACAATTACATCAATGGCTGTGGTGGCAGTCCTTATTCTACAATGTCGTTGGGCCGTGTCCCGTGCTCTCCTGAGTCATCGGTGTGCAGAGAGGCTAAGAAAAGACTTTCAGAAAGATGGACTATGATGACATTAGATAACAAGGGTCATCAAGAACAAAGACAAGCAAGAAAGAAAAGCTCTACCTTGGGTGAGATGCTTTCTCTTACCCACAAAAAGAAATCCTTAACACCTGAGGTTGAAATTATTGTTAATGAGGAACAAGAACCTGGCAAATCTGTTTCTTGCAGCCATTCTTTCAATGCAGAAACAAGCATTGAAGGTTCTCCTAAAAATCTCCCCAGGTCAAATTCTGTGCCTGCATCTTCTTCTGTCTATGAAAATGGCCTCTCAGTTGTAGTAAATGATCATAAGAACACTGGCAAAGCACAAGGCTCCAAGGTGCAGAAAAAGTCTAAGAGTGTGAGATCATCATTTAAAGGGAAAGTTGCAAGTTTTTTGTTTTCAAGGAGTAAGAAATCATCAACCAAGGAAAAAACAAGTTCATCTCAATCTAAAGATGAATCCAAATCTACTTCTACTGTCACTGAAACATTAGTTCTTCCAGCAAATTCACTTGGAGTCCTTAGGAGTGATGTGTCTCAAAGCATCAACGTGGATGGTTTTGAAGAGTGTTCTCTTGCAGCTCTATGTGAATCATCAGGAAAAAATTCAACAGATTCAGTCTCGAATGAACAAGAAGAAGACATGATTACACTAGAGCCTGGATTGACTATGCCAAGACCGATGGTGCCAGAGATTCATTCAAGCGGAAACCCGGATCAGCCAAGTCCAATCTCAGTGTTACAACCTCCATTTGAAGATTTTAATAATAATGCATCACATGAGTCCTtggactgtatgaagagtggtgaccaggGATCAGAGGTGCCACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTAGGACCCTATCATGGGATATTGATTCTAGTGCAGAAGTGGCAAGCCCCTATGCATTAAAACCCTTAATGGTTTCTTCCTTGGACTCCAAGGTAGATGATCAAGAGTGGCTTCTCTTGGTCCACAAACTACTATCAGCAGCTGGACTTGATGATCAACACCAATTTGACTCGTCTTACACTAGATGGCATTCCCTTGAGAGCCCATTGGACCCATCACTGAGGGACACATTATATGCCAATCTAAATGAGAAGGAGCCTCAGCCAAATATGCATGAGGGCAGAAGAAGGAGGATGAGATCAAACCATAAGCTTGTGTTTGACTATGTCAATGATGCACTATTGGAACTTGTTGGTTATGGGTCAGAAAAGTGCTTAAAGAGAAGTGGGAGCCGCTGCAGAGTCCTAGTCCAAGAGGGTGCATCAGCATCAGCAACATCATCTCCCTTATCGGTGGACCACATTGTGGCCCAAATGAAGGAATTAAGAGCAAGTGGGATGAGGTGTGAGTGGGAAAATGGTGGTGGGAACAGCACCAGCCTGGTGGTAGAAAATATTGTCAGAAAAGAGGTTGTGCAAATAGGGTGGGTTGAGCTTACGGATTTGGAGATTGATATTTTAGGGAAGGAGATTGAAGGGGACTTGATTCAAGAGCTTGTGGAGAATGCAGTGGTTGATTTATTAAATTAA 2697 0.409 MQMLIDKEMSKQKDSKHNLPNVVAKLMGLEALPKGEPNLSMERSHRRDYSQQMYGPIGLPFKHWQQEDRFMDREMLHEVHPSTEHVADKDMYEIWQQTQRGRFSEDVDGKRMALIRQKFMEAKRLSTDERMRQSEQFKDALEVLSSNSDLLIKLLDSQNVCDLYSTSPNETKRITLIKPLKMVDNDKCARKEKKNNRLIKKPSSVDQENPGNSPDNQKVDESPVLTTRIVLLKPSPWRTPEQKAVVSPTTSSSPLNLKSGNFHQGPEYDDVLESIRVANEVTQQMHKGLRSYQKDKTSYSSVFSNGYSDDESSFNKSYHEYASANFSDLEATSMSPLPRLSWDYNYINGCGGSPYSTMSLGRVPCSPESSVCREAKKRLSERWTMMTLDNKGHQEQRQARKKSSTLGEMLSLTHKKKSLTPEVEIIVNEEQEPGKSVSCSHSFNAETSIEGSPKNLPRSNSVPASSSVYENGLSVVVNDHKNTGKAQGSKVQKKSKSVRSSFKGKVASFLFSRSKKSSTKEKTSSSQSKDESKSTSTVTETLVLPANSLGVLRSDVSQSINVDGFEECSLAALCESSGKNSTDSVSNEQEEDMITLEPGLTMPRPMVPEIHSSGNPDQPSPISVLQPPFEDFNNNASHESLDCMKSGDQGSEVPLKSNLIDKSPPIESIARTLSWDIDSSAEVASPYALKPLMVSSLDSKVDDQEWLLLVHKLLSAAGLDDQHQFDSSYTRWHSLESPLDPSLRDTLYANLNEKEPQPNMHEGRRRRMRSNHKLVFDYVNDALLELVGYGSEKCLKRSGSRCRVLVQEGASASATSSPLSVDHIVAQMKELRASGMRCEWENGGGNSTSLVVENIVRKEVVQIGWVELTDLEIDILGKEIEGDLIQELVENAVVDLLN 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00395 898 Pfam Protein of unknown function (DUF3741) 116 159 IPR022212 -
Gma10g00395 898 MobiDBLite consensus disorder prediction 240 263 - -
Gma10g00395 898 MobiDBLite consensus disorder prediction 445 465 - -
Gma10g00395 898 Pfam DUF761-associated sequence motif 20 34 IPR032795 -
Gma10g00395 898 MobiDBLite consensus disorder prediction 202 223 - -
Gma10g00395 898 MobiDBLite consensus disorder prediction 390 414 - -
Gma10g00395 898 MobiDBLite consensus disorder prediction 612 638 - -
Gma10g00395 898 MobiDBLite consensus disorder prediction 514 538 - -
Gma10g00395 898 MobiDBLite consensus disorder prediction 187 201 - -
Gma10g00395 898 MobiDBLite consensus disorder prediction 187 223 - -
Gma10g00395 898 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 896 - -
Gma10g00395 898 MobiDBLite consensus disorder prediction 242 260 - -
Gma10g00395 898 Pfam Domain of unknown function (DUF4378) 710 890 IPR025486 -
Gma10g00395 898 PANTHER DUF3741 FAMILY PROTEIN 1 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00395 Gma-Chr10 3794741 3798725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00395 1 896 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 37.124 1.70e-128 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00395 - - gmx:100814302 1731.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00395 10 3794741 3798725 Gma10g00395 10 3794741 3798725 ECH
Gma10g00395 10 3794741 3798725 Gma13g01100 13 25157676 25161326 GST
Gma19g01618 19 45615000 45619299 Gma10g00395 10 3794741 3798725 PCT
Gma03g01564 03 41925720 41930366 Gma10g00395 10 3794741 3798725 PCT
Gma10g00395 10 3794741 3798725 Gma19g01618 19 45615000 45619299 PCT
Gma10g00395 10 3794741 3798725 Gma03g01564 03 41925720 41930366 PCT