Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00372 ATGGAAGCACATCCTACTTTCTCCATTGAAAGTTCAAAGCAACTCAATAACATGGGGATGTCTGGAGCACTTTCTTCATCCTTGTCAATCCTTCCAATACCCCCAGAAGAGTTGTTTCCCAAGCTGCCTGAATCACAGCTGGATTTTGTAGAACAAGAGCTTATGATAAGACCTTTTACTCATTCAAGTTATTTGAATTCCGGTGGAGTAATTGGGCATATTTTTTCGTCTTCCCCTGGATATTCAACTGATCTTCATCACTCAACTCTTTCATCTGCTGAAAAACATTCTACTAATGCTCATTTGATTTCACAATCATCAACTAACATCACCCAATTTCCATTATCATATTCTTCAAATACTGGACCACCAGCTTCAGCAACACCAAGTCATTATTCCAAAGAAAACAGTGTTTCCTGGCATACAGATTCCCTGCCAGGCTTTCTGGATTTTCCTGAAAATGGCTCTATTGATAATAATCCGGTAGAAAGTAGTGCCTGCCCTATAATGGCATCTGAGGAGTATTCTAAGCAAAATGATTGGCAGGAGTGGGCTGAGAGGCTAATCAGTGATGATGGCACATTGACTTCTAATTGGAATGACCTTCTTGCTGACAACATTCAAGATCTTGAGCCAAAGGGGCCATTCCAAGTTTCAAAACCACTTTCACAGATTCCAGGACATCAATCCCAAGGTCATCAACAACTTCCTGCTTCATATGGAGAAAATTGCGCTGGTGCTGCCCTCTCTTCCTCAGCAAATTCTGCTCCTGCTAAGTCACGAATGCGTTGGACACCAGAACTTCATGAGGCGTTTGTGGAGGCTGTCAACCAACTTGGGGGGAGTGAAAAAGCTACTCCAAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCATTTGCAGAAATACAGGACAGCTAGATATAGACCGGAGTCATCTGAAGGAGTTATGGACAAAAAAACAAGTTCGGTTGAAGAGATGTCATCTCTAGATTTGAGAACTGGTATTGAGATCACTGAAGCTCTACGATTACAAATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGAAACCTACAGTTGCGAATAGAAGAACAAGGTAGATGCCTCCAGATGATGTTTGAGAAGCAATGTAAACCTGGAACTGAAACGTTCAAGGCACCATCATTTACCACCATTGAGACTCCATTTGGGATGTCTTCAAATGCTACGAAAGATTCCCTTTCCAAAAATGAAATGGAAGCATCACTAGTACTGGACCATTGCAGGTCAGGACCTGATCAGGTTAATGGCAGTACCAGAGTTGAGGAAGGCTCATTGGAAAAGTGTGGGAAGCCTGATTCTCCCAAAACTCAACATGCTATAGCTAGTGAAGATAGTGCTCAAGCCCCAAAGCGTCAAAGAACTGAGTAA 1446 0.4212 MEAHPTFSIESSKQLNNMGMSGALSSSLSILPIPPEELFPKLPESQLDFVEQELMIRPFTHSSYLNSGGVIGHIFSSSPGYSTDLHHSTLSSAEKHSTNAHLISQSSTNITQFPLSYSSNTGPPASATPSHYSKENSVSWHTDSLPGFLDFPENGSIDNNPVESSACPIMASEEYSKQNDWQEWAERLISDDGTLTSNWNDLLADNIQDLEPKGPFQVSKPLSQIPGHQSQGHQQLPASYGENCAGAALSSSANSAPAKSRMRWTPELHEAFVEAVNQLGGSEKATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVMDKKTSSVEEMSSLDLRTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRCLQMMFEKQCKPGTETFKAPSFTTIETPFGMSSNATKDSLSKNEMEASLVLDHCRSGPDQVNGSTRVEEGSLEKCGKPDSPKTQHAIASEDSAQAPKRQRTE 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00372 481 MobiDBLite consensus disorder prediction 213 239 - -
Gma10g00372 481 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 259 313 IPR006447 GO:0003677
Gma10g00372 481 Pfam Myb-like DNA-binding domain 261 312 IPR001005 -
Gma10g00372 481 SUPERFAMILY Homeodomain-like 257 313 IPR009057 -
Gma10g00372 481 Pfam MYB-CC type transfactor, LHEQLE motif 344 390 IPR025756 -
Gma10g00372 481 Coils Coil 347 367 - -
Gma10g00372 481 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL4-RELATED 23 479 - -
Gma10g00372 481 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 23 479 IPR044848 GO:0003700
Gma10g00372 481 MobiDBLite consensus disorder prediction 433 481 - -
Gma10g00372 481 MobiDBLite consensus disorder prediction 222 238 - -
Gma10g00372 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 256 316 IPR017930 -
Gma10g00372 481 Gene3D - 258 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00372 Gma-Chr10 3548067 3554404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00372 53 388 G2-like Transcription Factor Family AT4G28610 53.333 3.33e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma10g00372 Myb_DNA-binding 9.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00372 - - gmx:100808743 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00372 10 3548067 3554404 Gma10g00372 10 3548067 3554404 ECH
Gma10g00372 10 3548067 3554404 Gma13g01069 13 24858690 24863146 GST
Gma19g01585 19 45250634 45255910 Gma10g00372 10 3548067 3554404 PCT
Gma03g01530 03 41572547 41576808 Gma10g00372 10 3548067 3554404 PCT
Gma19g02334 19 51960755 51964855 Gma10g00372 10 3548067 3554404 PCT
Gma03g02298 03 48194985 48199201 Gma10g00372 10 3548067 3554404 PCT
Gma10g00372 10 3548067 3554404 Gma19g01585 19 45250634 45255910 PCT
Gma10g00372 10 3548067 3554404 Gma03g01530 03 41572547 41576808 PCT