Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00371 ATGGCACTGATAGATCATAGACACCACACCAGGATTGATTCAGTCTTAAACACTGGTTCTCACTCCCGAAATGGATTTCGTTTCTCGGAAGAGGAAAATGGAGATTTCAACCAACAGCAGTGGCAACACAATGATGATCAAGCATTCTCTGCGGCCGGAAGTGTTGCTAATGAGGATTTTGAAGGGCAGAAAGCATTCTACAGCAATGCAGAGAAACGGAAAGAGAAGAGAAGTTTAAAGAGCAATGACCAAGCAGAAGATGACTACCTTTTGGCTGAGTCAAGGCAACCTTTGTGGTGCAAATCTGTGAAATCTGGCTTGCATTGTCTTTGGTTAGTAGACCAAATCCCCAAGTGGTTCCCCATTACTCGCGATACTTACCTTGAACGTTTGTCCATAAGATTTGAGCGTGAAGGGGGGGAGCCAAACCTTCTAGCACCAGTTGATATCTTTGTGACCACTGCAGACCCTTTGAAGGAACCACCTATTTTAACGGCGAACGCGGTTCTGTCAGTGTTGTCTGTTGATTATCCTGTTGAGAAGGTTAGCTGTTATGTCTCTGATGACAGTGCATCTATGCTTTTCTTTGATACCTTGTCAGAAACTGCTGAGTTTGCTAGAATATGGGTTCCTTTTTGTAACAAGTATAACATTGAGCCAAGGGCACCTGAGTTTTATCTCTCTTGGAAACTTGATTACTTGAAAGATAAGATGCACCCAACATTTGTTAAGGATCGCAGGGCCATGAAGagagagcatgaagaattcaagaacatggatgatcatccaggaatgattcagGTATGTCTAGGAAGTGCtggtgcactggacatagaaggcaaggaactgccaaggcttgtgtatgtttcatgggaaaaacgtcctggttatcaacatcacagtaaagctggtgctatgaatgctctggttcgagtttctgctgtgcttagcaatgcaccttttgcattgaatctggattgtgaccaatacatcaataatagcaacgttcttagggaggctatgtgctttttaatggacccccaaattggaaagaagttctgttatgtccaatttccacgaaggtttgatggcattgattgcaatgacagatatgctaatcacaatactgtattctttgatatcaacatgaaatgccttgatgggattcaagGCCAAAGATGGAGAGTTGCAGCTGGCCTTCATGCCAGCAGCTGTTGTTCTGGTGACTCTCCTCAGTCTTCATCTGATGATGACGAGACTGATCAAGAGCTTGAGGACTTTGATGAGGATGAGGAAGAGGAATTGTCCTTCATTTCTTCTGCTTTGATGGAAGATGGTGGACTTCAAAAAGGAACCAACGCTCTCGATTACTGA 1374 0.3122 MALIDHRHHTRIDSVLNTGSHSRNGFRFSEEENGDFNQQQWQHNDDQAFSAAGSVANEDFEGQKAFYSNAEKRKEKRSLKSNDQAEDDYLLAESRQPLWCKSVKSGLHCLWLVDQIPKWFPITRDTYLERLSIRFEREGGEPNLLAPVDIFVTTADPLKEPPILTANAVLSVLSVDYPVEKVSCYVSDDSASMLFFDTLSETAEFARIWVPFCNKYNIEPRAPEFYLSWKLDYLKDKMHPTFVKDRRAMKREHEEFKNMDDHPGMIQVCLGSAGALDIEGKELPRLVYVSWEKRPGYQHHSKAGAMNALVRVSAVLSNAPFALNLDCDQYINNSNVLREAMCFLMDPQIGKKFCYVQFPRRFDGIDCNDRYANHNTVFFDINMKCLDGIQGQRWRVAAGLHASSCCSGDSPQSSSDDDETDQELEDFDEDEEEELSFISSALMEDGGLQKGTNALDY 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00371 457 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 108 257 - -
Gma10g00371 457 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 399 454 - -
Gma10g00371 457 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 13 102 - -
Gma10g00371 457 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 258 393 - -
Gma10g00371 457 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 406 IPR029044 -
Gma10g00371 457 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 13 102 - -
Gma10g00371 457 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 108 257 - -
Gma10g00371 457 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 399 454 - -
Gma10g00371 457 MobiDBLite consensus disorder prediction 406 434 - -
Gma10g00371 457 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 258 393 - -
Gma10g00371 457 MobiDBLite consensus disorder prediction 414 434 - -
Gma10g00371 457 Pfam Cellulose synthase 258 394 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma10g00371 457 Pfam Cellulose synthase 148 257 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00371 Gma-Chr10 3538476 3543638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00371 98 391 Cell Wall Biosynthesis AT5G17420 68.000 5.01e-154 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00371 K10999 - gmx:100786824 729.939