Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00366 ATGAAGTGCCTACGCTCCGGGGAGTCGTTGGGAGGAGCTGACGATGAAGTGTTGTTTCCTTCGTCATCTGGATCTCTTGCAAGTGCAATCAAGGACTTTTCAGCTAGTGAAAATTCTTGCCTGGCTGAACAGTTTGATAAGAAGCCGGACACTGGCAACATAGAAGAAGCTGAATCATCCTTACGTGAGAGTGGCATCTTGAACTATGAGGAAGCTAGAGCTCTGCTAGGAAGATATGAATATCAGAAAGGGAATATAGTAGCTGCTTTGCATGTCTTTGAGGGAATAGATATAGGTGTTGTGACTCCTAAGATCAAAATCGCCCTTTCCCGAAGCAGAGAACGCCGCAAGAGACATTCTCAAAATCATGCTGAACCACAAATGTCTATACATTCTGTTGGCTtACTATTGGAAGCTGTATTCCTAAAAGCAAAATCTTTGCAGGTTCTTGAAAGGTTTAAAGAGGCTGCCCAATCTTGCAAAGTTATTCTGGATATAGTGGAGTCTTCATTGCCTGAAGGCATGCCTGATAACTTTGGTGCTGAATGTAAATTGCAGGAGACCCTCAACAAGGCAGTTGAGCTGCTTCCAGAATTATGGAAACTTGCTGATTGTCCACGTGAAGCTATTTTGTCTTACCGACGAGCACTCCTTCATCATTGGAATCTTGATGCAGAGACTATAGCAAAGATTCAGAAAGAATTCGTTGTTTTTCTTCTTTATAGTGGAGGAGAAGCAACACCCCCTAATCTCCGTTCCCAAATGGATGGCTCATTTGTGCCTAGAAACAACATAGAAGAGGCTATACTTCTTTTAATGATTTTATTAAGAAAGGTCTCTCTGAATAGAATCGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTGTCTGTTTCAGGCGATTTGACAGCTTTAGCCAATCAATTGGAAGAATTGCTTCCTGCGACTATCCATCGAAGTGAAAGGTACTATGCTCTAGCTCTTTGTTATTATGGAGCAGGTAAGGACTTGGTAGCCCTGGATCTTCTCAGAAAGTTGTTGAGGAGTAGAGAGGATCAACACCATGTTCCTGGTTTGTTAATGGCTTCTAAGATTTGTTGTGAGAACTCTACTCTTGCGGAAGAAGGAGTAAGCTTTGCTAAGCGAGTGCTTCAAAACTTGGATGGTAGATGTAATCAGCTAGAAAATCATGCCAATTTCTTTCTTGGTGTTTCACTTTCAGCACATTCGAAATTGGCTGCTTCTGATTCTGAGAGGCTTAAGAGACAATCTGAGGCACTTCACGCCCTAGAAACTGCTGGCAGAATGAGAAACCCCCTTGTACTATACCATCTAAGTTTAGAATACGCAGAACAAAGGAAGTTGGATGCTGCATTTTATTATGCAAAGTGCTTTCTAAAACTGGAAGGTGGTTCTAATGTTAAAGGATGGTTATTGTTAGCCCGGATATTGTCTGCTCAAAAACAGTTTTTGGATGCTGAATCTATTGTCAATACTGCTTTGGATCAAACTGGAAAATGGGATCAGGGTGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCAGTTAAGGAATGCCATTGAGACATATACGCAGTTACTTGCTGTTCTTCAAATTCAGAGTAAAGGATTTGGTTCTGGGAAGAAGCTATATAAGGACAATAGAGATCGTGCTAGGAACTTGGAAGTGGAAATATGGCATGATATTGCTTATGTATATATCAGTCTTTTACAGTGGCACGATGCAGAGGTGTGTCTTTCAAAATCCGAGGCCATCAAACCACTCTCTGCTTCCAGATGTCATGCAATAGGCATAGTGTACGAAGCAAAAGGTCAATACAAAGAGGCTCTAAAAGCTTTTGGTGATGCCTTGGACATTGATCCTGGCCATGTCCTTAGCATAATCTCCACTGCTGTAGTTCTTAAACGATGCAGTAATAAATCAAATCCAGCAGTTAAAAGCTTTCTGATGGATGCGCTACGGCACGACAGATTCAACGCTTCTGCTTGGTATAATCTTGGCCTTCTTCACAAGGCTGAGGGTACAGCATCATCATTAGTTGAAGCTGCCGAATGTTTTCAAGCAGCACACTTTCTTGAAGAATCTGCACCTGTTGAACCTTTCAGATGA 2145 0.4177 MKCLRSGESLGGADDEVLFPSSSGSLASAIKDFSASENSCLAEQFDKKPDTGNIEEAESSLRESGILNYEEARALLGRYEYQKGNIVAALHVFEGIDIGVVTPKIKIALSRSRERRKRHSQNHAEPQMSIHSVGLLLEAVFLKAKSLQVLERFKEAAQSCKVILDIVESSLPEGMPDNFGAECKLQETLNKAVELLPELWKLADCPREAILSYRRALLHHWNLDAETIAKIQKEFVVFLLYSGGEATPPNLRSQMDGSFVPRNNIEEAILLLMILLRKVSLNRIEWDPSILDHLSFALSVSGDLTALANQLEELLPATIHRSERYYALALCYYGAGKDLVALDLLRKLLRSREDQHHVPGLLMASKICCENSTLAEEGVSFAKRVLQNLDGRCNQLENHANFFLGVSLSAHSKLAASDSERLKRQSEALHALETAGRMRNPLVLYHLSLEYAEQRKLDAAFYYAKCFLKLEGGSNVKGWLLLARILSAQKQFLDAESIVNTALDQTGKWDQGDLLRTKAKLQIAQGQLRNAIETYTQLLAVLQIQSKGFGSGKKLYKDNRDRARNLEVEIWHDIAYVYISLLQWHDAEVCLSKSEAIKPLSASRCHAIGIVYEAKGQYKEALKAFGDALDIDPGHVLSIISTAVVLKRCSNKSNPAVKSFLMDALRHDRFNASAWYNLGLLHKAEGTASSLVEAAECFQAAHFLEESAPVEPFR 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00366 714 Gene3D Tetratricopeptide repeat domain 396 553 IPR011990 GO:0005515
Gma10g00366 714 PANTHER PROTEIN NPGR2 1 714 - -
Gma10g00366 714 SUPERFAMILY TPR-like 140 355 IPR011990 GO:0005515
Gma10g00366 714 Gene3D Tetratricopeptide repeat domain 24 355 IPR011990 GO:0005515
Gma10g00366 714 SUPERFAMILY TPR-like 513 686 IPR011990 GO:0005515
Gma10g00366 714 SUPERFAMILY TPR-like 421 537 IPR011990 GO:0005515
Gma10g00366 714 Gene3D Tetratricopeptide repeat domain 554 710 IPR011990 GO:0005515
Gma10g00366 714 ProSiteProfiles TPR repeat profile. 602 635 IPR019734 GO:0005515
Gma10g00366 714 Pfam Tetratricopeptide repeat 605 635 IPR013105 -
Gma10g00366 714 SMART tpr_5 602 635 IPR019734 GO:0005515
Gma10g00366 714 SMART tpr_5 672 708 IPR019734 GO:0005515
Gma10g00366 714 SMART tpr_5 137 170 IPR019734 GO:0005515
Gma10g00366 714 SMART tpr_5 476 509 IPR019734 GO:0005515
Gma10g00366 714 SMART tpr_5 322 355 IPR019734 GO:0005515
Gma10g00366 714 SMART tpr_5 568 601 IPR019734 GO:0005515
Gma10g00366 714 SMART tpr_5 512 545 IPR019734 GO:0005515
Gma10g00366 714 PANTHER PROTEIN NPG1 1 714 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00366 Gma-Chr10 3514119 3519863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00366 1 714 Calmodulin-binding Proteins AT4G28600 59.091 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00366 K21843 - gmx:100800762 1368.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00366 10 3514119 3519863 Gma10g00366 10 3514119 3519863 ECH
Gma10g00366 10 3514119 3519863 Gma13g01064 13 24804044 24808909 GST
Gma19g01576 19 45169959 45175296 Gma10g00366 10 3514119 3519863 PCT
Gma03g01523 03 41470344 41475816 Gma10g00366 10 3514119 3519863 PCT