Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00358 ATGGATTCTGCAAGGAGTTGGCTTCAGAAGTTCCAGCCTCGAGATAAAACCAGGGCTGCTGGGAAGAAAAAGGAGGAGGATGGTAATGGAGGAAACCAGGATTCGAACGAAGCCATAGATGAAGCATTGCTTTCCAGTGTCACGAAGCAGAAGGTGGCAGCAGCAAAGCAGTACATTGAAAACCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAGGATCAAAACAACCTGCTTAAGTTTTTAGAGAAAAAGGAAACAGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGAAGATTTTGAGTTATTGACAATGATTGGAAAAGGCGCATTTGGGGAGGTCAGAGTCTGTAGGGAGAAAACTAGTGGTCACGTATATGCAATGAAAAAGCTGAAAAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAGCATGTTAAAGCCGAAAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAGCTTTATTGTTCTTTCCAGGATGATGAACATTTGTATCTTATTATGGAGTATCTACCGGGTGGGGATATGATGACTCTACTTATGAGAAAGGATATCTTGACTGAAGATGAAGCCAGATTTTATGTGGGAGAAACAGTTTTAGCTATTGAATCTATACATAAGCACAATTATATACATAGGGATATCAAGCCAGACAACTTATTACTTGATAGATATGGACACTTGAAATTGTCAGATTTTGGACTTTGTAAACCATTAGATTGTAGTACACTTGAAGAAAATGATTTTTCTGTGGGTCAGAATGTGAATGGATCTACACAAAGCTCAACTCCTAAACGCTCACAACAGGAACAACTGCAACACTGGCAAATAAACAGGAGAACACTTGCTTATTCCACAGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTACGAAATGCTGGTGGGATATCCTCCTTTTTATTCTGATGATCCAATGTTAACATGCAGGAAGATAGTAAATTGGAAAACTTACTTGAAATTTCCTGAAGAAGCTAGGCTATCCCCAGAAGCTAAAGATCTTATTAGTAAACTTTTGTGTAATGTCAATCAAAGGCTGGGGTCAAAAGGTGCAGATGAAATAAAGGCTCATCCATTCTTCAAAGGTGTTGAATGGAATAAGTTGTATCAAATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTAGATACTCAGAATTTTGAAAAGTTTGATGAGtctgacagccaaactcaatcatcttcaagatctggtCCATGGAGGAAGATGCTTTCATCTAAGAAGGATTTGAATTTTGTTGGATACACTTACAAGAACTTTGAAATTGTAAATGATTATCAAGTTCCCGGGATGGCTGAACTGAAGAAGAAACAGTCCAAACCAAAGAGGCCAACCATCAAGTCACTTTTCGAAACACCAGAGGCGTCCGATACGTCTGCAAATGATCAACCTGCTCAAGGAAGCTTTTTGAAGCTCTTGCCACCCCAGTTAGAGGTATCTCCTCATCGCGACAAGAATCTTCCTCCCAGGTCCTAA 1665 0.3952 MDSARSWLQKFQPRDKTRAAGKKKEEDGNGGNQDSNEAIDEALLSSVTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVEDFELLTMIGKGAFGEVRVCREKTSGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEHLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLKLSDFGLCKPLDCSTLEENDFSVGQNVNGSTQSSTPKRSQQEQLQHWQINRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMLTCRKIVNWKTYLKFPEEARLSPEAKDLISKLLCNVNQRLGSKGADEIKAHPFFKGVEWNKLYQMEAAFIPEVNDELDTQNFEKFDESDSQTQSSSRSGPWRKMLSSKKDLNFVGYTYKNFEIVNDYQVPGMAELKKKQSKPKRPTIKSLFETPEASDTSANDQPAQGSFLKLLPPQLEVSPHRDKNLPPRS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00358 554 Gene3D Phosphorylase Kinase; domain 1 119 445 - -
Gma10g00358 554 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma10g00358 554 MobiDBLite consensus disorder prediction 9 31 - -
Gma10g00358 554 MobiDBLite consensus disorder prediction 514 529 - -
Gma10g00358 554 Pfam Protein kinase C terminal domain 435 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
Gma10g00358 554 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 552 - -
Gma10g00358 554 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 552 - -
Gma10g00358 554 MobiDBLite consensus disorder prediction 497 554 - -
Gma10g00358 554 MobiDBLite consensus disorder prediction 445 465 - -
Gma10g00358 554 SMART pkinase_C_6 417 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma10g00358 554 Pfam Protein kinase domain 122 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00358 554 SUPERFAMILY Protein kinase-like (PK-like) 94 465 IPR011009 -
Gma10g00358 554 SMART serkin_6 121 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00358 554 CDD STKc_NDR_like 119 481 - -
Gma10g00358 554 ProSiteProfiles Protein kinase domain profile. 121 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00358 554 Gene3D Transferase(Phosphotransferase) domain 1 205 434 - -
Gma10g00358 554 MobiDBLite consensus disorder prediction 1 36 - -
Gma10g00358 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Gma10g00358 554 Coils Coil 63 83 - -
Gma10g00358 554 MobiDBLite consensus disorder prediction 448 464 - -
Gma10g00358 554 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00358 Gma-Chr10 3437585 3445144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00358 1 517 AGC Kinase Gene Family AT2G20470 79.389 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Gma10g00358 Pkinase 1.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00358 K08790 - gmx:100779528 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00358 10 3437585 3445144 Gma10g00358 10 3437585 3445144 ECH
Gma10g00358 10 3437585 3445144 Gma13g01056 13 24727315 24734363 GST
Gma10g00358 10 3437585 3445144 Gma19g01570 19 45103685 45110809 PCT
Gma10g00358 10 3437585 3445144 Gma03g01514 03 41405837 41409859 PCT