Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00344 ATGGAATCGGAAGGGCAAAAGGGTACGGTGAACCCGTCCGCGATGTTAGCGTCTCTGCTTAGTAGGAGAGCCAAACTTCACGAAGAGCTTCGCAGCATTGAAAAGCAGGTAGATTTTTCAACATTGGCGTCTGGGTGCCCTTCGAAAGGGGCGAAAACTTTCTCTCACTATGTGTATGATATGGAGACGAGTTACTTACAAGATCCTGGACAATGTGGGAATGTATTAAAAGGATTTGAAGGCTTCCTATCTTCGTCGAAGAACACTGCACTCTTGAAAAGGTCTAGAAAGTTTCAACCTGAAGATAGGCTCTTCTCACTATCTTCAGTGACCTCGCCAGCGGCGGAAGAGCTTGCAGCTGGACGAGATGATGGTAGACCAGATTATGGTCCTGGTCGTTCAAAAGGTGGAGGAATTTATGCTAATGGACAGGGTAAACCAAAGAAAGGTAGAGGTGGGGCAAGAGAAGCAAAGAGAGCAAGGGCTTCAAGTGAACAAGATTTTGATTATGAAGATGATCCTGACCTGACCTTGCACTTGTGTGTAACCAATTCTTCTCTTTTGCTTTCTCTCTCCAAATTCATCACAACTTCTCTCGTACCTCTGCAGAGAAGTAAACATATAGGAGTGAGAGGGAGGGAGAGAGAAGGAAAGCTTGGTAGCGATGGGGAAGGAGCAAGTTCaggtgctgaatgccctggacgtggcaaagacacaatgAATCAGGACCCGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTGAGGAATTCACTGCTTGTGTTGGGTGTGATTAACATTTTAGGCTTCATGTTCACTTTCTTGGTGCCTGAGGCCAAGGGTAGATCCTTGGAGGAGATTTCGGGAGAGCAAGAAGAGGAGACCAAGAAAAAGAAAAAGACCAAACAACAAAGGTGGCAGAAGAAATTGAAGGCATATAATCTATCTTCACTTTTAGAGTCCCTTCCTGAGGTGAAGGCATCAAAGAAACCAGGTTACGAGAATGACAGCAAACTTAAGTGTAAATCCAGGCAGATATTGAGTGAAAGAGATCGAATTTCTGCTGTTCTCGACGATCCTACCTTTCAAGCGGATCCACTGTCTGCCACTCATGAATATGTACAGAACAAACAACCGGTAGTAGAGGAACAACCCAAGAAAAAAGTGAACAAAAATGGATCCAAGAAGAAGAAATCAAAGGCTTCAACTGGGCTACAATCTATGGAAATTTAG 1239 0.4326 MESEGQKGTVNPSAMLASLLSRRAKLHEELRSIEKQVDFSTLASGCPSKGAKTFSHYVYDMETSYLQDPGQCGNVLKGFEGFLSSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRPDYGPGRSKGGGIYANGQGKPKKGRGGAREAKRARASSEQDFDYEDDPDLTLHLCVTNSSLLLSLSKFITTSLVPLQRSKHIGVRGREREGKLGSDGEGASSGAECPGRGKDTMNQDPSKADAGYPAGIGVRNSLLVLGVINILGFMFTFLVPEAKGRSLEEISGEQEEETKKKKKTKQQRWQKKLKAYNLSSLLESLPEVKASKKPGYENDSKLKCKSRQILSERDRISAVLDDPTFQADPLSATHEYVQNKQPVVEEQPKKKVNKNGSKKKKSKASTGLQSMEI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00344 412 PANTHER UNCHARACTERIZED 55 178 IPR015418 GO:0000123|GO:0016573
Gma10g00344 412 PANTHER UNCHARACTERIZED 1 38 IPR015418 GO:0000123|GO:0016573
Gma10g00344 412 MobiDBLite consensus disorder prediction 211 243 - -
Gma10g00344 412 Gene3D MFS general substrate transporter like domains 249 307 IPR036259 -
Gma10g00344 412 MobiDBLite consensus disorder prediction 287 302 - -
Gma10g00344 412 MobiDBLite consensus disorder prediction 116 169 - -
Gma10g00344 412 MobiDBLite consensus disorder prediction 378 412 - -
Gma10g00344 412 Coils Coil 16 36 - -
Gma10g00344 412 MobiDBLite consensus disorder prediction 287 307 - -
Gma10g00344 412 PANTHER CHROMATIN MODIFICATION MEAF6-LIKE PROTEIN 55 178 - -
Gma10g00344 412 PANTHER CHROMATIN MODIFICATION MEAF6-LIKE PROTEIN 1 38 - -
Gma10g00344 412 Coils Coil 286 306 - -
Gma10g00344 412 Pfam Histone acetyltransferase subunit NuA4 56 113 IPR015418 GO:0000123|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00344 Gma-Chr10 3254628 3265940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00344 241 300 Inorganic Solute Cotransporters AT5G43370 66.667 1.72e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00344 K11344 - gmx:100306348 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00344 10 3254628 3265940 Gma10g00344 10 3254628 3265940 ECH
Gma10g00344 10 3254628 3265940 Gma13g01032 13 24480519 24484289 GST