Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00340 ATGGAAGAGGAGTCTAAGGAGAAAAGGGACACTAAGGGGGAGCCACGGTATAGAGGAGTGCGGCGGCGGCCGTGGGGGAAGTTTGCGGCCGAAATCCGGGACCCGGCCCGGCACGGAGCCCGAGTTTGGCTGGGGACATTTCTCACGGCAGAGGAGGCTGCAAGGGCTTATGACCGAGCTGCCTATGAGATGAGGGGTGCTTTAGCTGTTCTCAATTTTCCAAATGAGTATCCTTCATGCTCTTCTATGAGCTCATCTTCAACATTAGCACCTTCTTCTTCATCTTCAAATTCAATGCTTAAAAATGATCATGGTAAACAAGTTATTGAGTTCGAGTGCTTGGATGACAAATTGTTAGAGGACCTTCTTGATTGTGATGACTATGCCTACGAGAAAGACTTGCCTAAGAACTGA 414 0.4903 MEEESKEKRDTKGEPRYRGVRRRPWGKFAAEIRDPARHGARVWLGTFLTAEEAARAYDRAAYEMRGALAVLNFPNEYPSCSSMSSSSTLAPSSSSSNSMLKNDHGKQVIEFECLDDKLLEDLLDCDDYAYEKDLPKN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00340 137 PANTHER OS09G0571700 PROTEIN 10 127 - -
Gma10g00340 137 PANTHER DNA-BINDING DOMAIN 10 127 IPR044808 GO:0003700|GO:0009873
Gma10g00340 137 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Gma10g00340 137 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Gma10g00340 137 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Gma10g00340 137 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Gma10g00340 137 Gene3D AP2/ERF domain 16 75 IPR036955 GO:0003700|GO:0006355
Gma10g00340 137 MobiDBLite consensus disorder prediction 78 101 - -
Gma10g00340 137 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Gma10g00340 137 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
Gma10g00340 137 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00340 Gma-Chr10 3195193 3195772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00340 14 127 AP2-EREBP Transcription Factor Family AT3G23230 61.667 3.91e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma10g00340 AP2 4.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00340 - - gmx:100781487 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00340 10 3195193 3195772 Gma13g01024 13 24361605 24362279 GST
Gma10g00340 10 3195193 3195772 Gma19g01547 19 44837261 44837870 PCT
Gma10g00340 10 3195193 3195772 Gma03g01493 03 41168542 41168980 PCT