Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00333 ATGGGTAGCAACCTGCACCGACTGCTCAGAAGCTTCTGTTTGGGCACTGATTGGAAGTATGCCATCTTTTGGAAGCTCAAACAACGGGCTCGGATGATCTTGACATGGGAGGATGCTTACTATGACAATCCAAGTATTTGTGAGTCTTCCGAAAACAAGAGCTGCCATAATTCATTGGAGCAGATTGGCAGTGCGGATTTTTCGCATGATCCTCTAGGGTTAGCTGTGGCAAAGATGTCATATCATGTATATTCATTAGGGGAAGGAATTATTGGACAGGTAGCTGTTACTGGAAAGCATCGGTGGATCTGTGTAGATAATCATGTTACAAGTTCTGGCCCATCTTTTGAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGAACCATTGTTGTTGTAGCAGTAGTTGCCCTTGGAGTTGTTCAGCTTGGCTCTTTAAATAAAGTTACTGAAGATATGGGGGTCGTGTCCTGTATCCGAAGTCTCTTTTTGTCTACTCAAGATTACACAATAAGCCATGTTCATAATCAAGTACAAAATAGTGTGAAGAATTCCTCATCTGTGCTGGATACCAAAACTTCAAAAAGCATGCCTGCCTTACATGATACAGAGAAAACCATGAAGCATGAAGCACTGGATATTTTAATGCCCTTTCAATGTCCTAGGAAGAATTATTCACCTCACGCTGTTCATCAGAAGATGGTTGTTGATGTGGCCAAGCATGATTTTCCTGAATTAAACAGTGATAGAAGTTCCATTTTGCTTCAGTCAATGTCAAATATGATGAACGTGGAGCAACAGAAATTAGTAGGGATGAGACCTGTAAATGAGAGTAAGTTTGAAGGGAACAGTGGCTGTGAAGATAAAAGTTTGGAATCAGGAAAAAATGTTTCATCATTTTTACACAATTTAGTAATGGATAATAATGGTGTCAATGATTTAGCATGCCCGTCAGAAAATGTTGGAGTAGATCCAGTATCCTTCTCTTCAGGCTTTCTTGATGCAGCTGTTTGTGTGAGCGATAAGTTTCAGTATGTAGACATAAACGAAAAAGGAGTGTTGAATGTGCCCAGACCTTCAGATGCAAACTTCCAAATAAAAAGTGAGAAGTCAAAGTTTCAGACTGAACCTTGTTACAAGGATACCTCATACACAATGAAGTTTCCTGCTGGCTATGAGCTACATGAAGCACTTGGACCAAGTTTTCTGAAAGGGAGTAAGTGTTTTAATTGGGCAGCGGAAGCAAATCAAGATGTTAAAAATGCTGAGATGTCAGATGAGATTAGCTGTAGCCAATTGACTTCTGAATTTCGCCCAGAGCATCTCTTGGAAGCTATGGTGGCTAACATTAGCCATAGTAATAATAATGTTAATAGTGAGTTATCATTTTCGACATCAATGCAGGCTGCAATTGCCTCAGGAAGAAATCCTGAAGGTTCTGTTCACACTATTAATTCTGAAGGCTGTTCAATAGATCAGCTTCCTTTTGTTAAAGAGGACAAACATTATAGTTTGAGTTCATCTGGGATATGCGGTGTAATGTCCCCAAAGGGATTTTCTTCTACATGTCCTAGTTCATGTAGTGAACAGTTTGAGAGGTCTTCTGAACCAACTAAGAACAGCAAGAAGAGGGCTAGGCCTGGGGAAAGTTGTAGGCCTAGACCAAGGGACAGACAACTGATACAAGATCGTATTAAGGAGTTGAGGGAACTGGTGCCAAATGGTGCAAAGTGCAGTATTGATTCATTGCTGGAGTGCACCATTAAACACATGCTCTTTCTTCAGAACATAACTAAGCATGCTGACAAGCTAAATAAATTTGCGGATACAAAGACAAAGTTACATCACATGGAAAAAGACATTCCTGGTCAACAAGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATCTGAAAGTTAGTTCAATACTAGTGGAGAATCTTAACCAGAATGGCCAGATGTTTGTTGAGatggtgtgtgaagagtgcagccattttcttgaaatagcagacgccatcagaagcttaggtatgacaattttgaatggtgcaacagaagctcacggtgagaagacatttgtatgttttgtggtcgaggcaggatcagagGGCCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGTCACTTGTTCAATTACTTCAATCCAAGAGCACAATGTATTCATAA 2202 0.3769 MGSNLHRLLRSFCLGTDWKYAIFWKLKQRARMILTWEDAYYDNPSICESSENKSCHNSLEQIGSADFSHDPLGLAVAKMSYHVYSLGEGIIGQVAVTGKHRWICVDNHVTSSGPSFEFADGWQSQFSAGIRTIVVVAVVALGVVQLGSLNKVTEDMGVVSCIRSLFLSTQDYTISHVHNQVQNSVKNSSSVLDTKTSKSMPALHDTEKTMKHEALDILMPFQCPRKNYSPHAVHQKMVVDVAKHDFPELNSDRSSILLQSMSNMMNVEQQKLVGMRPVNESKFEGNSGCEDKSLESGKNVSSFLHNLVMDNNGVNDLACPSENVGVDPVSFSSGFLDAAVCVSDKFQYVDINEKGVLNVPRPSDANFQIKSEKSKFQTEPCYKDTSYTMKFPAGYELHEALGPSFLKGSKCFNWAAEANQDVKNAEMSDEISCSQLTSEFRPEHLLEAMVANISHSNNNVNSELSFSTSMQAAIASGRNPEGSVHTINSEGCSIDQLPFVKEDKHYSLSSSGICGVMSPKGFSSTCPSSCSEQFERSSEPTKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQNITKHADKLNKFADTKTKLHHMEKDIPGQQGSSWAMEVGGHLKVSSILVENLNQNGQMFVEMVCEECSHFLEIADAIRSLGMTILNGATEAHGEKTFVCFVVEAGSEGQNNRNLHRLDILWSLVQLLQSKSTMYS 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00333 733 MobiDBLite consensus disorder prediction 533 561 - -
Gma10g00333 733 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 548 597 IPR011598 GO:0046983
Gma10g00333 733 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 733 - -
Gma10g00333 733 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 733 IPR043561 GO:0003700|GO:0006355
Gma10g00333 733 MobiDBLite consensus disorder prediction 538 561 - -
Gma10g00333 733 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00333 Gma-Chr10 3131176 3137731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00333 1 729 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.774 6.67e-163 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00333 - - gmx:100777740 1458.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00333 10 3131176 3137731 Gma10g00333 10 3131176 3137731 ECH
Gma19g01543 19 44789727 44797106 Gma10g00333 10 3131176 3137731 PCT
Gma03g01489 03 41128396 41136835 Gma10g00333 10 3131176 3137731 PCT
Gma10g00333 10 3131176 3137731 Gma19g01543 19 44789727 44797106 PCT
Gma10g00333 10 3131176 3137731 Gma03g01489 03 41128396 41136835 PCT