Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00323 ATGGGGATTCCAGAAAATATTGTTGTTGGTTCTCATGTTTGGGTTGCAGATCCAGAACTAGTTTGGATTGATGGACTGGTACTGAATATTAATGGTGAAGAAGCAGAAATTCAAACTAGTAATGAGAATAAGGTTGTTTCCCGTTTGTCAAAATTATATCCCATGGATATGGAAGCGCCTACTGATGGGGTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGGAGTGCTGCATAATTTGGAAACCAGATACATGATGAATGAAATATATACTTATACCGGGAATATTCTCATTGCAATCAATCCCTTCCAAAATCTTTCACACCTGTATGATACTAATGTGATGCAAAGATACAAGGGAGCAACGATTGGAGGCTTGGGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCAATGATTAATGAGGAAAAAAGCAACTCAATTCTGGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACCAAAATGCTTATGCAGTACCTGGCATATTTGGGTGGTAACACTTCATCTGAAGGACGAACTGTTGAAAAACAAGTACTAGAAtcaaatccagttcttgaagcatTTGGTAATGCAAAAACTGTTAGAAATGACAATTCCAGCCGTTTTGGAAAATTTGTTGAGATTCAATTTAATAAGTATGGACGAATATCTGGTGCAGCCATTAGAACTTATCTTCTTGAGAAATCTCGTGTTTGCCAAATCTCAGATCCTGAGCGTAACTATCATTGTTTCTACCTTCTCTGTGCTTCTCCTCCTGAGGAAAAGGAGAAATATAAGTTGGGAGATCCTAGATCATTTCACTACCTTAATCAATCCAATTGCTATGAATTAGTTGGTGTAAATGCTGCTCAAGAGTATCTGAGCACCAAGAGAGCCATGGATATAGTGGGAATCAGTCAGGAGGAGCAGGATGCTATTTTCAGAGTTGTAGCTGCTATTCTTCATCTTGGAAACATTAAGTTTGCAAAATCAGAAGAAACTGATTCATCAGTTCTAGAAGATGAAGCATCCAGGTTTCATCTCCAAACAACAGCAGAACTTCTCATGTGTGATCCTAATTGTTTGGAAGGTGCACTACGTGAGCGTGTGATGATTACTCCAGAAGAAATCATCAAAAGAAGTCTTGATCCTCTTGGTGCTACAGTTAGCAGGGATGGTTTAGCCAAAACACTATATTCTCGATTATTTGACTGGTTAGTCCAAAAAATTAATATCTCCATTGGGCAGGATCCTAGCTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTCAAACGAATAGTTTTGAGCAGTTTTGTATAAATTTCACAAATGAAAAGCTGCAACAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATACACAAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTGGATCTCATTGAAAAGAAACCAGGTGGAATCATTGCTCTGCTCGATGAAGCTTGTATGTTTCCGAAGTCAACTCATGAAACATTTTCACAGAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCAGATTTCTCTGTTGTTCATTATGCAGGGGAGGTTCAGTATCAATCTGAGCAATTTTTAGACAAGAACAAAGACTATGTTGTTCCTGAACATCAAGACATGCTAAGTGCTTCAAAATGTTCATTTGTATCAGGCCTTTTTGCTCCACTTTCTGAGGAAACAGCCAAATCTGCTAAATTTTCTTCTATTGGTTCTCGTTTCAAGCTACAATTACAACAGTTGATGGATGCACTCAATCTGACAGAGCCACACTATATTAGATGTATAAAGCCAAATAGTCTATTAAAACCTTTCATATTTGAAAATATGAATGTTATCCAACAATTACGATCTGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTCCCCACTCACTGGACCTTTCATGATTTCTTAACTCGATTAGGCATTCTTGCTCCGGAGGTTCTTCAAGGGAACTTCGAAGAAAAGGATTCATGTAAAAAGATTTTGGAGAAGATTGGGCTGACAGGTTATCAGATAGGTGAAACACAAATATTCCTAAGAGCTGGTCAGATGGCTGAATTGGATGCTCGGAGAGCATTCCTGCTCAGTAATTCTGCAATAGTTATCCAAAAGCATACTAAAACTCATTTTAGTCAGAAAAGATATATTGCATTGCAAAAGTCCTCTGTTTTTCTGCAATCCATTTGCAGAGGAGAACTGGCTCGAAGATCGTATTATCACATGAAGAGGGAAGCAGGTGCAGTCAGAATTCAAAAGTATATGCGTGGAACACTAGCCAGGAAATGGTACACCGAAATAAAGATCTCTGCCATTGTCTTGCAGACAGGTTTTCGAGCAGTGGCTGCTTGTAATAAATTTAGATATAGAAAGCAAATTAGTGCATCGACTACTATTCAGTCCAATTGGCGCCGGCATAAAGCTCTCTCTGACTATCAGAACCTTAGGAAAGCATCAATCAGTTCACAAACCATCAATCACTCCAGTGATAAACATGAACAGAAGGTTGTTTTTGAGACACCTGCGCAAAATGAAAGTCCTTCTATGgaagaatgttcaaatcctgtccaagaagaatcctcaagtcctttccaagaTGATGAAAGCATTGAAGCTATCAGGGATTCCTCTATTCCTCTCAAAGACACTGAAAAGATTGAGGTTCTTACTATAGAAATAAAAAACTTGAAGGTCATGTTGCAGGAAGAAAAACAAAGAGGTGATGAATATGAAAGGAAATATGTAGAAGCTCAAGGATCTAGTGAAGAGTTACGCAAAAAGTTAGCAGAAACTGAAAAAAGAGTACATCAGCTTCAGGACTCGTTGAACAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGAGCTGAAGGCGATCTTGAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGGGTTGACATTGCTTCCAGTAACTCTGATACTTCATCTACAGACTCTGATTTCACATTTCCGGCTCCTGTTTCAAATACTGAACTTTTATCTTCCCCAGAGTCAAATTCTTTCCAACTAGTAGTTCAGGATGTCACTGCAGGGGATGGATCGGGATCTGAAAGTGGAAAGGAGGGTTCATTTGATGATTTCTTCTAG 3237 0.3803 MGIPENIVVGSHVWVADPELVWIDGLVLNINGEEAEIQTSNENKVVSRLSKLYPMDMEAPTDGVDDMTKLAYLHEPGVLHNLETRYMMNEIYTYTGNILIAINPFQNLSHLYDTNVMQRYKGATIGGLGPHVFAIAEAAYRAMINEEKSNSILVSGESGAGKTETTKMLMQYLAYLGGNTSSEGRTVEKQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFNKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSNCYELVGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVVAAILHLGNIKFAKSEETDSSVLEDEASRFHLQTTAELLMCDPNCLEGALRERVMITPEEIIKRSLDPLGATVSRDGLAKTLYSRLFDWLVQKINISIGQDPSSKCLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKDHKRFIKPKLARSDFSVVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSASKCSFVSGLFAPLSEETAKSAKFSSIGSRFKLQLQQLMDALNLTEPHYIRCIKPNSLLKPFIFENMNVIQQLRSGGVLEAVRIKCAGFPTHWTFHDFLTRLGILAPEVLQGNFEEKDSCKKILEKIGLTGYQIGETQIFLRAGQMAELDARRAFLLSNSAIVIQKHTKTHFSQKRYIALQKSSVFLQSICRGELARRSYYHMKREAGAVRIQKYMRGTLARKWYTEIKISAIVLQTGFRAVAACNKFRYRKQISASTTIQSNWRRHKALSDYQNLRKASISSQTINHSSDKHEQKVVFETPAQNESPSMEECSNPVQEESSSPFQDDESIEAIRDSSIPLKDTEKIEVLTIEIKNLKVMLQEEKQRGDEYERKYVEAQGSSEELRKKLAETEKRVHQLQDSLNRMISSMSSQVAELKAILSTSSRLSSTFRPIARVDIASSNSDTSSTDSDFTFPAPVSNTELLSSPESNSFQLVVQDVTAGDGSGSESGKEGSFDDFF 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00323 1078 MobiDBLite consensus disorder prediction 1019 1078 - -
Gma10g00323 1078 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma10g00323 1078 MobiDBLite consensus disorder prediction 1019 1063 - -
Gma10g00323 1078 MobiDBLite consensus disorder prediction 880 906 - -
Gma10g00323 1078 CDD MYSc_Myo11 76 720 IPR036018 -
Gma10g00323 1078 Gene3D - 439 623 - -
Gma10g00323 1078 Gene3D - 856 1013 - -
Gma10g00323 1078 SUPERFAMILY Tropomyosin 919 995 - -
Gma10g00323 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 785 IPR027417 -
Gma10g00323 1078 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma10g00323 1078 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma10g00323 1078 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma10g00323 1078 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma10g00323 1078 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma10g00323 1078 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Gma10g00323 1078 Pfam IQ calmodulin-binding motif 833 851 IPR000048 GO:0005515
Gma10g00323 1078 Pfam IQ calmodulin-binding motif 760 778 IPR000048 GO:0005515
Gma10g00323 1078 Pfam IQ calmodulin-binding motif 786 803 IPR000048 GO:0005515
Gma10g00323 1078 PANTHER MYOSIN 6 1016 - -
Gma10g00323 1078 SMART iq_5 830 852 IPR000048 GO:0005515
Gma10g00323 1078 SMART iq_5 734 756 IPR000048 GO:0005515
Gma10g00323 1078 SMART iq_5 782 804 IPR000048 GO:0005515
Gma10g00323 1078 SMART iq_5 805 827 IPR000048 GO:0005515
Gma10g00323 1078 SMART iq_5 757 779 IPR000048 GO:0005515
Gma10g00323 1078 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Gma10g00323 1078 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma10g00323 1078 ProSiteProfiles IQ motif profile. 783 807 IPR000048 GO:0005515
Gma10g00323 1078 Gene3D - 666 733 - -
Gma10g00323 1078 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma10g00323 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 859 IPR027417 -
Gma10g00323 1078 Gene3D Kinesin motor domain 65 662 IPR036961 -
Gma10g00323 1078 MobiDBLite consensus disorder prediction 880 907 - -
Gma10g00323 1078 Gene3D - 735 784 - -
Gma10g00323 1078 Gene3D - 785 835 - -
Gma10g00323 1078 Coils Coil 925 987 - -
Gma10g00323 1078 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma10g00323 1078 Gene3D - 252 310 - -
Gma10g00323 1078 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 1016 - -
Gma10g00323 1078 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00323 Gma-Chr10 3023228 3045259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00323 1 984 Myosins gene family AT1G54560 64.023 0.0 1402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00323 K10357 - gmx:100819436 2090.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00323 10 3023228 3045259 Gma10g00323 10 3023228 3045259 ECH
Gma10g00323 10 3023228 3045259 Gma13g01007 13 24181639 24203726 GST