Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00317 ATGGAAAAGCCAATCTGCGTAGAATCCGTCATCATCCTCGTCAAGGCCGGCTTCCTAGTCGATCACACCATCGCCACCCTCTCCGACCACCTCGACCCCGACGACTGCATCATCAACGGCGGCAACAAGTCGTACGAGAACACCGAGCACCGCATGAACCTCATCGCCGACAAAGGCCTCCTCTACCTTAGCATGGGCGTCTCTTACAGCGAAGACGGCGCACACCACGACCCCTCCCTCATGCCCGATGGGTCCCACCATGCCTACTCCAACGTCCAGGACATCCTCTACAAAATCGCTGCCCAAGTCGAGGACGACCCCTACGTCACCTACATCGGCGAGGGAGGCTCTGGAAACTTGGCTGCCATGGTTGGTTTCAGAGGTTGCTACAGTTTTTCCGATGGAAGAGAAGGAACAGGAATAAGGCAATTGAAGACCAAAGAAGGATTGCAAAAAAAAGGGCTATGCAGGACTAATTGGTTATTGTATAAGCTTCCAGGGGCATTTTGGAGTCTTGACATCATCATTTGCAGAGAAATTGCAGTTACAGGCGAAAAGAACAGTATGATTGTTCTGGCATGTTTCACCTTTGATGGAAATAAACCCCCGAAGCAGTGGCCTGAGGGAGATAATAAGGAGATTGAGTGTAGAGCTGCAACATCAAAGCCTAGATATGTTTTGGCCAACAACTCAGATCTCAACTTCTTACCCATCAAAATTGACCTGAATTGTGCTCGCATGGTGACGGCAGAGTTGGTGGGTACTTTTATTTTGATGTTCTGTGTGTGTGGAATCACTGCAAGCACACGATTCCAAAATGGTGCAGTGGGCCTTCTGGAGTATGCAGCTATAGCAGGATTAACAGTGGTGGTGATTATTTTCTCTATAGGGCCAATATCTTGTGCACACGTTAACCCAGCAGTCACAATAGCCTTTGCAACAATTGGTCAATTTCCATGGTTCAAGGTTCCAGTTTACATAATAGCACAGACAGTAGGTTCTATGTCGGCAACATACATAGGTAGCCTTGTATACGGCATAAAATCAGAGGCTATGATGACCATGCCACTCCAAGGGTGCAACTCTGCCTTCTGGGTGGAGGTTATTGCAACTTTCATCATCATGTTCCTCATTGCAGCTTTGACATCTGAATCTCAATCAGTGGGCCATTCATCTGGCTTTGTTGCTGGAATGGCAATTGGGCTTGCTGTACTAATCACAGGCCCAGTCTCAGGTGGATCAATGAATCCAGCAAGATCATTAGGTCCAGCAATTCTCTCATGGAAATTCAAGAACATATGGATATACATGGTAGCCCCTAGTGGTGGAGCTGTAGCAGGAGCTGCAATGTTTCGTTTCCTACGCCTTCGAGACCAACATTCTAGTATTTTGTCCTCCCCAAACATCAGTGATGTTGGTCGTTCCATACCCTTTTGCTCAAGCCACGATGCCGTAGCCATGCAAAGCCACGCGTCAAGACAAGAACTCCTCAACACAATAACAACAAAATCAAATTCTTCGGAAATCAAAGCAGCAGCGATCTCGAAACAGCGTAATTCCACGATCTCTTACACCTCCGGTGTTGCACATGAGTATAATGGCAAGCTCACATTCACACAGATCGTGGTGGCTTCCTCTATTGGGTTGATATTTGCTGCAGCAATGCATTATGGCATTAAAACAATGAAGGATCGAAAGATCATCCCACGTCTGAGAAAAACAAAGGGAAACCAAGCCCCaaagcttgagaagttctctcattacgtagCTAGGCAAATGGGGTTCAAAGACAGGAGAAGTTGTCCACTTCTTTGTAAATTGGCTTCTGAATACATAAGGAAATCAGAGGGATGTGAAGATGATCTCTACGCCTTCTTCGAGAACGAACCAGATGTGGATTCACTATTTGTGAAGCTTGTGGAGGAGTTTGAGAGATGCATTCTAAGTTACTTTGCATTCCATTGGACCCATGGTGATGTCTTGATAAGTCAGATCTGTTCTCTCTTTGTCTGGTTATTGCGGGTGTTTAGCTCTGAAGTTGAACCAAAAGCGAAGCTCAGGCACATAGTTATGGCGGCAACTAGGGAACAGAGGTTCGAGAGAGTGACAAAGAAtctgaaggtggctagagttttcaacacattagtggaagagatgaaagcaatgggacttgtaacaaatgatgactctcaATGCACAGAGGTGATGGCTCCAGTAGCTCACAGTGATAGGAGCCCAGTGCTTCTTTTCATGGGTGGTGGCATGGGAGCTGGCAAGAGCACTGTGCTTAAGGACATTCTCAAAGAACCTTTCTGGGAAGGAGCAGCAGGCAATGCCGTAATCATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTCAGTGCAAGAGGTCATCAGGACATGATTCGAACAGCTGAACTGGTGCACCAATCATCCACTGATGCAGCCTCATCCCTCCTAGTAACAGCACTAAATGAGGGGCGTGATGTAATTATGGATGGCACACTCTCCTGGTTACCATTTGTTGTGCAGACAATAACAATGGTTAGAAATGTCCACCGCCGCCGTTACCGCATGGGACCTGGCTACAAGGTGAATGAGGGTGGAACTGTGACCGAAAACTATTGGCAACGAATTGAGGGGGAAGAGCCAGAACAAGTTGGAGGCAAAAGGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTGTGCGATGCTTATCTTGCCGTCATTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCAGTAAGAGTGAAGTCACAATTGACATCTCACAAGAGATTTGCTGAGGCATTTCTGACTTATTGTCAGCTAGTAGACAATGCTCGGCTATACAATACAAATTCTTTGGAAGGCCCACCTAAGATAAATGTTGTAAAGTTGATAGGATGGAAAGATAGAGACAAGACATTGCTAGTTGATCCAGATGAAATAGATTGTTTGAAGAGGGTTTCTACATTGAATGAAAAGGCCAACAACATATATGAACTTTACAAGCACCCCAACCCAACTTGTGAAGCTGGATCTATATGGAAAGACATTGTACTATCTCCTTCAAGGTTGAACATCCAACAAGAGCTGAAGTATTCAATCCTAAAGGTTGAGAGATTAAAACGTACTAGTAGCTCTTTATGA 3171 0.4431 MEKPICVESVIILVKAGFLVDHTIATLSDHLDPDDCIINGGNKSYENTEHRMNLIADKGLLYLSMGVSYSEDGAHHDPSLMPDGSHHAYSNVQDILYKIAAQVEDDPYVTYIGEGGSGNLAAMVGFRGCYSFSDGREGTGIRQLKTKEGLQKKGLCRTNWLLYKLPGAFWSLDIIICREIAVTGEKNSMIVLACFTFDGNKPPKQWPEGDNKEIECRAATSKPRYVLANNSDLNFLPIKIDLNCARMVTAELVGTFILMFCVCGITASTRFQNGAVGLLEYAAIAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGQFPWFKVPVYIIAQTVGSMSATYIGSLVYGIKSEAMMTMPLQGCNSAFWVEVIATFIIMFLIAALTSESQSVGHSSGFVAGMAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKNIWIYMVAPSGGAVAGAAMFRFLRLRDQHSSILSSPNISDVGRSIPFCSSHDAVAMQSHASRQELLNTITTKSNSSEIKAAAISKQRNSTISYTSGVAHEYNGKLTFTQIVVASSIGLIFAAAMHYGIKTMKDRKIIPRLRKTKGNQAPKLEKFSHYVARQMGFKDRRSCPLLCKLASEYIRKSEGCEDDLYAFFENEPDVDSLFVKLVEEFERCILSYFAFHWTHGDVLISQICSLFVWLLRVFSSEVEPKAKLRHIVMAATREQRFERVTKNLKVARVFNTLVEEMKAMGLVTNDDSQCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWEGAAGNAVIIEADAFKESDVIYKALSARGHQDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWLPFVVQTITMVRNVHRRRYRMGPGYKVNEGGTVTENYWQRIEGEEPEQVGGKRRKPYRIELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLTSHKRFAEAFLTYCQLVDNARLYNTNSLEGPPKINVVKLIGWKDRDKTLLVDPDEIDCLKRVSTLNEKANNIYELYKHPNPTCEAGSIWKDIVLSPSRLNIQQELKYSILKVERLKRTSSSL 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00317 1056 PANTHER UNCHARACTERIZED 526 1054 IPR044802 -
Gma10g00317 1056 Gene3D - 3 119 - -
Gma10g00317 1056 ProSitePatterns MIP family signature. 303 311 IPR022357 -
Gma10g00317 1056 Gene3D Glycerol uptake facilitator protein. 221 463 IPR023271 -
Gma10g00317 1056 SUPERFAMILY Aquaporin-like 243 460 IPR023271 -
Gma10g00317 1056 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 114 IPR036291 -
Gma10g00317 1056 PRINTS Major intrinsic protein family signature 322 341 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g00317 1056 PRINTS Major intrinsic protein family signature 246 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g00317 1056 PRINTS Major intrinsic protein family signature 366 384 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g00317 1056 PRINTS Major intrinsic protein family signature 285 309 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g00317 1056 PRINTS Major intrinsic protein family signature 397 419 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g00317 1056 PRINTS Major intrinsic protein family signature 434 454 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g00317 1056 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 526 1054 - -
Gma10g00317 1056 Pfam Zeta toxin 740 848 IPR010488 GO:0005524|GO:0016301
Gma10g00317 1056 Gene3D - 729 967 IPR027417 -
Gma10g00317 1056 CDD MIP 250 454 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g00317 1056 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 8 103 IPR006115 GO:0050661
Gma10g00317 1056 Pfam Major intrinsic protein 244 450 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g00317 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 741 877 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00317 Gma-Chr10 2939251 2957197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00317 241 459 Major Intrinsic Protein MIP AT4G10380 41.096 6.73e-49 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00317 - - mtr:MTR_1g070385 1287.32