Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00301 ATGGCGAATCACCCTTCCGAAGCTCCCACCGACGACTTCCTGGAGCAAATCCTGGGCCTCTCGACCTTCGCCTCCGCCGACCCCGCCGCCGACGCCTCTCCGATGATGCTTCAGCTCAACTCCGGCGAcgccgccacccacctcgccgccacccacctcgccgccTTCCACGCGCCGCCCTACCAGCTCGGCCTCAGCTTGGACCAAGGTAAGGGACCATTCCTCACGCCCGAGGACGCTTCTGGAAGCGGCAAGCGCTTCCGCGACGACGTCGTTGATACCAGACCTAAAAACTTTTTTCATGGACAACCCATGCCTACTACTGTTCCTACTGCTCCACATCCACCAGCAGTGCGACCTAGAGTGCGGGCTAGAAGAGGACAGGCTACAGATCCGCATAGTATAGCTGAAAGGTTGCGCAGAGAGAGAATAGCAGAAAGAATCAGGGCTTTGCAAGAACTGGTCCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCACCACTGGTAACTGATATCCCATTATCGTCAGTCGAGGAAGAAGGCGGTGAGGGAAGAAACCAGCCAGCCTGGGAGAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCCAAGCTTATGGAAGAAAATGTGGGTGCTGCCATGCAGTTTCTTCAATCAAAAGCACTCTGCATCATGCCCGTCTCACTAGCTTCAGCAATATACCAGTCACAACCCTCAGGCACTTCTAGTATAGTTAAGCCTGAAACTAATCCTCCTTCATAA 852 0.5035 MANHPSEAPTDDFLEQILGLSTFASADPAADASPMMLQLNSGDAATHLAATHLAAFHAPPYQLGLSLDQGKGPFLTPEDASGSGKRFRDDVVDTRPKNFFHGQPMPTTVPTAPHPPAVRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPVSLASAIYQSQPSGTSSIVKPETNPPS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00301 283 MobiDBLite consensus disorder prediction 99 118 - -
Gma10g00301 283 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Gma10g00301 283 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 272 - -
Gma10g00301 283 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 187 IPR036638 GO:0046983
Gma10g00301 283 SMART finulus 134 183 IPR011598 GO:0046983
Gma10g00301 283 Gene3D - 123 185 IPR036638 GO:0046983
Gma10g00301 283 Pfam Helix-loop-helix DNA-binding domain 133 177 IPR011598 GO:0046983
Gma10g00301 283 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00301 Gma-Chr10 2790587 2795372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00301 56 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 80.426 1.52e-117 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma10g00301 HLH 1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00301 - - gmx:100793177 488.419