Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00292 ATGAGTCGCCTACCATCAAACCTGTTGCCAGTTGATGGAAGCCCGGAGTGGATGAACAGGGGTGACAACACGTGGCAGCTGACGTCAGCTACTCTGGTGGGCCTGCAGAGCGTTCCGGGCTTGGTCATCCTCTACGGCAGCATAGTGAAGAAGAAATTAATGGGCTTTGAACTCTGCCTTCATGGCCCTGTACGCTTTTGCGGCGGTTCTTGTTTTCTGGGTGGGGTGGTGCTACAAAATGTCATTCGGCGAGAGGATCCTTCCATTTCTGGGGCAGCCAAACACGGCCTTGGACAGGGAATTCGTTTTTCGCCAAGCTTTTGCAGGGGAATTTCCCAACGCCACCATGGTGTACTTTCAGTTGGCTTTTGCTGCCATCAGGTAGGACCAAGGGCAGTGAAGGATAGAGAGAGGTTCCCTCCAAACAACATACTTCTGATGGCTTACCATGGATTCAACGGTGGAGATCCATACGCAGCCAGCATAGATGCATCTCTGGCCGTCCTTAACACCCACGTCTGCACGGCAATGAGCTTGTTGACTTGGCTTTTCCTTGACATACTCTTCTTTGGAAAACCTTCCGTCATTGGTGCCACTCAAGGCATGATCACTGGCCTGGTTTGCAACACCCCTGCTGCCGttttccacacccatgccgtggctggTAGCTTAGGTGGCATTTTGGCTGGTTTCTTTGCTGACCCTAACCTTTGTTATCTCTTCTATGGAGTACAAGATTCCTTGCACTATACGGGTCTTGTTTATGGCATATTCAATGGGAATCTCAAGACAGGGTTCAGGCAAATGGGGGTTCAGCTTCTTGGCATTGTTTTTGTAATACTTCTGAATGTCACCACAACTAGCATTGTGTGTTTGTTGGTTAGGATGATAGTTCCACTTAGGATGAGTGAAGATGACTTGCAAGTTGGGGATGAAGCAGTTCATGGCGAGGTTGCATATGCATTGTGGGGTGATGGAGAGAAGCTTGAGACTGCTGCTGGTGAGGCTTTAACTTCTGAAAAGAATCATGAATTGCCAACTGTGGAACTTATAAAAAGTTTGAGTGATGCTCCATTAATCGATTGA 1086 0.4724 MSRLPSNLLPVDGSPEWMNRGDNTWQLTSATLVGLQSVPGLVILYGSIVKKKLMGFELCLHGPVRFCGGSCFLGGVVLQNVIRREDPSISGAAKHGLGQGIRFSPSFCRGISQRHHGVLSVGFCCHQVGPRAVKDRERFPPNNILLMAYHGFNGGDPYAASIDASLAVLNTHVCTAMSLLTWLFLDILFFGKPSVIGATQGMITGLVCNTPAAVFHTHAVAGSLGGILAGFFADPNLCYLFYGVQDSLHYTGLVYGIFNGNLKTGFRQMGVQLLGIVFVILLNVTTTSIVCLLVRMIVPLRMSEDDLQVGDEAVHGEVAYALWGDGEKLETAAGEALTSEKNHELPTVELIKSLSDAPLID 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00292 361 Gene3D Ammonium transporter AmtB like domains 214 326 IPR029020 -
Gma10g00292 361 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 213 341 - -
Gma10g00292 361 SUPERFAMILY Ammonium transporter 124 302 - -
Gma10g00292 361 PANTHER AMMONIUM TRANSPORTER MEP2 123 213 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma10g00292 361 PANTHER AMMONIUM TRANSPORTER MEP2 213 341 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma10g00292 361 Pfam Ammonium Transporter Family 144 215 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gma10g00292 361 Pfam Ammonium Transporter Family 214 320 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gma10g00292 361 Gene3D Ammonium transporter AmtB like domains 119 213 IPR029020 -
Gma10g00292 361 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 123 213 - -
Gma10g00292 361 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 4 53 - -
Gma10g00292 361 PANTHER AMMONIUM TRANSPORTER MEP2 4 53 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00292 Gma-Chr10 2696134 2699300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00292 124 344 Inorganic Solute Cotransporters AT2G38290 43.173 7.68e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00292 K03320 - gmx:112999382 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00292 10 2696134 2699300 Gma02g01309 02 15193263 15195407 GST