Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00279 ATGGGGAGTGTAGATTATGAGTACCCTTTAGGCATGAACAACGTTGAGAGAGTGCACCAAGTGGAGGTTCCACCACCTCAACCGTTTTTCAAGTCTCTTAAGTACTCTTTGAAGGAGACTTTCTTCCCAGATGACCCTTTGAGGCAGTTCAAGAACAAGCCAGCTTCCAAGAAGTTCATGCTTGGCCTTCAGTACTTCTTCCCCATCTTCGAATGGGCACCCAGATACACCTTTCAGTTCTTCAAAGCTGACCTCATAGCTGGCATCACCATAGCTAGCTTGGCCATTCCTCAGGGCATCAGTTATGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTATATTCGAGCTTTATACCACCATTGATTTATGCGATGATGGGTAGCTCGAGGGATTTGGCAGTGGGGACTGTGGCAGTTGGATCGCTTCTGATGGGTTCGATGTTGAGTAATGCGGTTGATCCCAATGAAGACCCAAAGCTTTACCTCCACCTTGCTTTCACAGCTACATTATTTGCTGGTGTTTTTCAGGCTGCCTTGGGTCTGTTTAGGTTGGGGTTAATCGTGGATTTTCTTTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACGGTGGTGTGTCTGCAGCAACTAAAATCGATTCTTGGCCTTGTGCATTTCACCCATGGAGCTGATATCATATCAGTGATGCGCTCTGTTTTCACCCAAACTCATGAGTGGAGGTGGGAAAGCGCTGTGTTAGGATTTGTCTTCATTTTCTTCCTCCTAAGCACAAGATACTTCAGCAAAAAACGACCAAGGTTTTTTTGGGTGTCGGCAATGGCGCCATTGACATCTGTTATACTGGGAAGTCTCTTGGTTTATTTCACTCACGCCGAGAAGCACGGTGTTGAAGTGATAGGAGAATTGAAGAAGGGTTTGAATCCACCATCACTGACAAATCTGGTATTTGTGACGCCTTACATGACCACAGCTGTCAAAACAGGCATTGTCGTTGGCATTATATCGCTTGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTATAAAAATTACAACATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACGTAGTTGGTTCTTTCACCTCTTGCTACCTCACAACTGGACCATTTTCGCGTTCAGCTGTGAACTATAACGCTGGATGCAAGACAGCAGCATCCAACATCATAATGTCAATTGCAGTAATGTTGACATTGTTATTCCTAACACCATTGTTCCATTACACTCCCCTGGTGGTGCTATCAGCCATTATTGTATCTGCAATGCTTGGCCTCATAGATTATGAAGCAGCCATCCATCTATTTAAGGTCGACAAATTTGACTTTGTCGTATGCATGAGTGCATACGTTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCTATTGCGATATCTGTACTTCGGGTACTTCTATTTATTGCAAGGCCAAGGACATTTGTTTTGGGAAACATTCCAAATTCTGTGATATACAGAAATGTTGAGCACTATCCAAATGCAAAACATGTTCCTGGAATGCTAATTCTAGAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGATGGATTGATGAAGAGGAAGAAAGAATCAAAGCTACAGGGGAGACTAGTTTGCAGTATGTTATAATTGATATGAGTGCTGTTGGAAACATTGATACAAGTGGAATAAGTATGCTTGAAGAGGTCAAGAAGATTACAGAGAGAAGAGAGCTACAACTTGTTTTGGTCAATCCTGTAAGCGAGGTGATGAAGAAACTGAACAAATCGAAGTTCCAAAATCATTTAGGGGAGAAATGGATCTATCTTACTGTTGAAGAGGCCGTTGGAGCATGCAACTTCAATCTACGTCCAAGCAAAACGAATCCCAAGAAAGATGAATCAGAGGGTTGGAACAATGTTTGA 1974 0.4331 MGSVDYEYPLGMNNVERVHQVEVPPPQPFFKSLKYSLKETFFPDDPLRQFKNKPASKKFMLGLQYFFPIFEWAPRYTFQFFKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSNAVDPNEDPKLYLHLAFTATLFAGVFQAALGLFRLGLIVDFLSHATIVGFMGGAATVVCLQQLKSILGLVHFTHGADIISVMRSVFTQTHEWRWESAVLGFVFIFFLLSTRYFSKKRPRFFWVSAMAPLTSVILGSLLVYFTHAEKHGVEVIGELKKGLNPPSLTNLVFVTPYMTTAVKTGIVVGIISLAEGIAVGRSFAMYKNYNIDGNKEMIAIGTMNVVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLFKVDKFDFVVCMSAYVGVVFGSVEIGLVIAIAISVLRVLLFIARPRTFVLGNIPNSVIYRNVEHYPNAKHVPGMLILEIDAPIYFANASYLRERITRWIDEEEERIKATGETSLQYVIIDMSAVGNIDTSGISMLEEVKKITERRELQLVLVNPVSEVMKKLNKSKFQNHLGEKWIYLTVEEAVGACNFNLRPSKTNPKKDESEGWNNV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00279 657 Pfam Sulfate permease family 81 461 IPR011547 GO:0016021
Gma10g00279 657 Gene3D STAS domain 492 638 IPR036513 -
Gma10g00279 657 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Gma10g00279 657 Pfam STAS domain 513 631 IPR002645 -
Gma10g00279 657 SUPERFAMILY SpoIIaa-like 514 635 IPR036513 -
Gma10g00279 657 TIGRFAM sulP: sulfate permease 68 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma10g00279 657 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 655 - -
Gma10g00279 657 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Gma10g00279 657 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Gma10g00279 657 PANTHER SULFATE TRANSPORTER 2 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00279 Gma-Chr10 2547132 2557067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00279 16 657 Inorganic Solute Cotransporters AT4G02700 66.719 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00279 K17471 - gmx:100810196 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00279 10 2547132 2557067 Gma10g00279 10 2547132 2557067 ECH
Gma10g00279 10 2547132 2557067 Gma02g01322 02 15347407 15355845 GST
Gma19g01500 19 44337474 44345916 Gma10g00279 10 2547132 2557067 PCT
Gma03g01443 03 40623464 40636878 Gma10g00279 10 2547132 2557067 PCT
Gma10g00279 10 2547132 2557067 Gma19g01500 19 44337474 44345916 PCT
Gma10g00279 10 2547132 2557067 Gma03g01443 03 40623464 40636878 PCT