Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00225 ATGAGTTCCCTCATCCACCTTTTTCTCTTTTTCTTCTTCTTCCTCTGTCTCTCTCACTCTTCTCTATGTGACACGTGTCCCCTGAACTTCACCATCCTGGGCAGAACCAAACCCACATCCTTCGACACCTCCCGCTGCCAGGTCATCAGCCAAGCCCTCCGCCTCGTCCAGTCCGACTACCTCCGCCGCAGCGGCTTCTTCCTCCCTCCCCTCAACGCCTCCGACACATGCTGGACCCACTTCCAGTCCTACGTTAACAACTTCGACCAAACCTACAACATCACCACCTCCTGCGGCTTCAAAACCTCCTGGATCTCCCAAGGCTGCAACAACGTCACCACCAAACAAGACTTCGAATCCTTAGTCCCTCAATCCGCCCTACAAAACATGCGCAACAACTGCAACCAGTCGCTCGAGAACAACTCCCCTTGCGCCCTCTGCACCACTTCGTTCTCCACTCTCCCGCCACTGGGAGACTCCGTCGGAAATCTCACCTACTGCACCAAGTACGCTTCTATCTACGCCGCCGCCTTCGCCAACCGCTTCGGCCCCTCCGACCCCGGCACCGCCAAGTGCTTGTTCTCCCTTCAATTCTCCTCCAACAACAACAACAACTCCTCCTCCTCCTCCAAGAGAAAAAAGGTTGTTATTGCTGTTGTTTCTGTTGTCGGTGTCTTGGTCGTGTTACTGCTTGTTCTCGGGGTTTGGGTTTATTGCAAGCTGGAAGACAAGGTTGCGGGGGACAAGGACGTTCGTGTAGCGGAAATCGGTCTGGTTTCTGGATTGGATTCCATGGAGCAGAGCACTACTTTAATCAGGTTTACTTTTGATGATATTAAGAAAGCAACCAAGAATTTCTCCAGAGATAACATAGTTGGAAGAGGTGGTTACGGGAATGTGTACAAAGGCTTGCTTCCTGATGGAAGCGAGGTTGCGTTTAAGAGGTTCAAGAATTGTTCAGCTTCCGGTGATGCAAGCTTCACTCACGAAGTTGAGGTTATTGCTAGTGTCAGACATGTTAACCTTGTTGCCTTAAGAGGCTATTGTTCTGTTACTACTCGTTTGGAAGGTTACCAGAGGATTATTGTTTGCGATATGGTGAAAAACGGGAGTCTCCATGACCATTTGTTTGGTTCTAATGGTGTGAAATTAAGTTGGCCAATTCGTCAGAAGATTGCTCTAGGCACGGCTAGAGGGTTGGCTTATTTGCATTATGGGGCTCAACCTGCAATCATTCATAGAGATATTAAAGCAAGTAACATACTTTTGGATGATAAGTTTGAAGCTAAAGTTGCGGATTTTGGACTAGCCAAGTTTAACCCTGAGGGGATGACACATATGAGCACAAGGGTGGCTGGAACAATGgggtatgttgctcctgaatatgctttgtatggacaattgacagagagaagcgatgtgttcagttttggggttgtgcttcttgagcttttgagtggGAGGAAGGCTCTTCAGATGAACAATGATGGTCAACCCTCTTCTTTGACTGATTGGGCTTGGTCGTTGGTTAGAACGGGGAAGGCCTTGGATGTTATTGAAGATGGCATGCCACAATCGGGTTCAGAACATGTTCTTGAGAAGTATGTGTTGATTGCTGTGCTTTGTTCTCATCCGCAGTTGTATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGATGGAGACTGATGAATCGGTTCCTTCAATACCTGAAAGGCCAATCCCTCTTGTTGCTGGAAGGCTTGATATTGAGAGATCTGTGAGTAGTAGTGGCTCTGGTCAGCTCTCTAGTCCAACGGGTTATCGATCATATACTATAGAAAGTGATCGCCAATCTTCTAATTCTAGGGATGAAAGAAGCTCAAGCTCTAGGATTTTGAGTACAGATTGA 1890 0.4545 MSSLIHLFLFFFFFLCLSHSSLCDTCPLNFTILGRTKPTSFDTSRCQVISQALRLVQSDYLRRSGFFLPPLNASDTCWTHFQSYVNNFDQTYNITTSCGFKTSWISQGCNNVTTKQDFESLVPQSALQNMRNNCNQSLENNSPCALCTTSFSTLPPLGDSVGNLTYCTKYASIYAAAFANRFGPSDPGTAKCLFSLQFSSNNNNNSSSSSKRKKVVIAVVSVVGVLVVLLLVLGVWVYCKLEDKVAGDKDVRVAEIGLVSGLDSMEQSTTLIRFTFDDIKKATKNFSRDNIVGRGGYGNVYKGLLPDGSEVAFKRFKNCSASGDASFTHEVEVIASVRHVNLVALRGYCSVTTRLEGYQRIIVCDMVKNGSLHDHLFGSNGVKLSWPIRQKIALGTARGLAYLHYGAQPAIIHRDIKASNILLDDKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRKALQMNNDGQPSSLTDWAWSLVRTGKALDVIEDGMPQSGSEHVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETDESVPSIPERPIPLVAGRLDIERSVSSSGSGQLSSPTGYRSYTIESDRQSSNSRDERSSSSRILSTD 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00225 629 Gene3D Phosphorylase Kinase; domain 1 257 365 - -
Gma10g00225 629 Pfam Protein kinase domain 287 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00225 629 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Gma10g00225 629 SUPERFAMILY Protein kinase-like (PK-like) 262 561 IPR011009 -
Gma10g00225 629 ProSiteProfiles Protein kinase domain profile. 286 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00225 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Gma10g00225 629 Pfam SPARK 24 153 IPR043891 -
Gma10g00225 629 MobiDBLite consensus disorder prediction 585 610 - -
Gma10g00225 629 MobiDBLite consensus disorder prediction 585 629 - -
Gma10g00225 629 Gene3D Transferase(Phosphotransferase) domain 1 367 568 - -
Gma10g00225 629 CDD STKc_IRAK 292 561 - -
Gma10g00225 629 PANTHER OS01G0253100 PROTEIN 7 615 IPR045271 GO:0004714|GO:0006468
Gma10g00225 629 SMART serkin_6 286 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00225 629 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 7 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00225 Gma-Chr10 2071525 2074300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00225 1 615 Receptor kinase-like Gene Family AT2G48010 60.932 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gma10g00225 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00225 - - gmx:100800760 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00225 10 2071525 2074300 Gma10g00225 10 2071525 2074300 ECH
Gma02g01372 02 15890879 15892881 Gma10g00225 10 2071525 2074300 ECH
Gma10g00225 10 2071525 2074300 Gma02g01372 02 15890879 15892881 GST
Gma19g01438 19 43645259 43646989 Gma10g00225 10 2071525 2074300 PCT
Gma03g01372 03 39890880 39892137 Gma10g00225 10 2071525 2074300 PCT
Gma10g00225 10 2071525 2074300 Gma19g01438 19 43645259 43646989 PCT
Gma10g00225 10 2071525 2074300 Gma03g01372 03 39890880 39892137 PCT