Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00224 ATGAAGGAAAAGTTGGATTCCCCAGTTACAGTGCTTGAGGACTATTTCAGGAGCTCAGATTCAGAATCAAGTTCTTCCAAAGAGCCTTCAGCGGATTCTGAGTCTCAAGAGCTTTCAAAACCTGCTTCTAGGTGGCATTCATTTATTCAATTGTTGAGGAGCGGATCGAAGAAACAGATGAACAACACATTGCATCCTCTCAGTGTTCTCAAGCTCTCCAAAAGAATGAGCACTAGCATGAGGGAGTCCATTCTCCCAATTTGTCTCTTAGATGCAACTGCTTCCCCTTGCAGGTCACCTTGGAAGATCTTTACTCATCATGAGATTCAGGTTGCAACCAATTCTTTTAGCCAAGAAAATTTGATTGGGAAGGGTGGTTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATCGTCAATTAGTGGCAATTAAACGTTTAACAAGAGGAACAGCTGATGAAATCATAGGGGATTTCTTATCAGAACTTGGCGTAATGGCGCATGTAAACCATACAAATACTGCTAAGCTGGTTGGTTATGGAGTGGATGGTGGAATGTATCTGGTTCTTGAATTGTCTGAAAAAGGGAGCCTTGCTTCAGTTCTTTATGGTTCGAAGGAAAAACTACCGTGGTGTATTAGACACAAAATTGCATTAGGAACAGCAAAGGGTATATTATATCTTCATGAGGGATGTCAAAGAAGAATTATCCACAGGGATATAAAAGCTGCCAATATATTGCTCACGAAGGACTTTGAGCCTCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAAAATTGGACTCATCACACCGTTTCAAAATTTGAAGGAACTTTCGGTTACCTAGCTCCTGAATACTTGCTGCATGGCATAGTAGACGAGAAAACGGACGTATTTGCATTTGGTGTATTGCTATTAGAATTAGTGAGTGGGCGAAGAGCACTTGATTATTCACAGCAAAGCCTTGTGTTGTGGGCAAAACCATTGCTGAAAAAAAATGATATTATGGAGCTGGTTGATCCTTCACTAGCAGGTGATTTCGACTCTAGGCAAATGAATCTTATGCTCTTGGCTGCTTCACTATGCATACAACAGTCTTCAATTCGTCGTCCCTCTATAAGACAGGTTGTACAGCTTCTGAATGGGAACCTTAGCTGCTTCAAGGGCATGAAGAAAACTCGAATGCCATTCTTCAGAAGAGTGTTCAGGGAAGAACTACATGATTCTGATTAG 1236 0.4134 MKEKLDSPVTVLEDYFRSSDSESSSSKEPSADSESQELSKPASRWHSFIQLLRSGSKKQMNNTLHPLSVLKLSKRMSTSMRESILPICLLDATASPCRSPWKIFTHHEIQVATNSFSQENLIGKGGYAEVYKGCLPNRQLVAIKRLTRGTADEIIGDFLSELGVMAHVNHTNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKEKLPWCIRHKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTKDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLKKNDIMELVDPSLAGDFDSRQMNLMLLAASLCIQQSSIRRPSIRQVVQLLNGNLSCFKGMKKTRMPFFRRVFREELHDSD 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00224 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Gma10g00224 411 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Gma10g00224 411 Gene3D Transferase(Phosphotransferase) domain 1 193 395 - -
Gma10g00224 411 Pfam Protein kinase domain 117 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00224 411 PANTHER OS08G0249100 PROTEIN 1 409 - -
Gma10g00224 411 SUPERFAMILY Protein kinase-like (PK-like) 97 381 IPR011009 -
Gma10g00224 411 ProSiteProfiles Protein kinase domain profile. 116 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00224 411 MobiDBLite consensus disorder prediction 14 41 - -
Gma10g00224 411 MobiDBLite consensus disorder prediction 1 41 - -
Gma10g00224 411 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 409 - -
Gma10g00224 411 Gene3D Phosphorylase Kinase; domain 1 91 190 - -
Gma10g00224 411 SMART serkin_6 116 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00224 Gma-Chr10 2060473 2064206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00224 103 377 Trihelix Transcription Factor Family AT1G68690 41.958 4.76e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma10g00224 Pkinase 5.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00224 - - gmx:100780587 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00224 10 2060473 2064206 Gma03g02223 03 47556379 47566552 ECH
Gma10g00224 10 2060473 2064206 Gma10g01549 10 42566487 42577405 ECH
Gma10g00224 10 2060473 2064206 Gma10g00224 10 2060473 2064206 ECH
Gma02g01373 02 15903121 15906859 Gma10g00224 10 2060473 2064206 ECH
Gma15g00942 15 7859179 7862732 Gma10g00224 10 2060473 2064206 ECH
Gma10g00224 10 2060473 2064206 Gma02g01373 02 15903121 15906859 GST
Gma19g01436 19 43631927 43634815 Gma10g00224 10 2060473 2064206 PCT
Gma03g01370 03 39872119 39874639 Gma10g00224 10 2060473 2064206 PCT
Gma10g00224 10 2060473 2064206 Gma19g01436 19 43631927 43634815 PCT
Gma10g00224 10 2060473 2064206 Gma03g01370 03 39872119 39874639 PCT