Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00220 ATGACTGAAAGTAATAATGAAGTCAACCTCAGTGAATCTAAGAGTGTTGTTCCACTCAACACTTGGGTGCTTATCTCCAATTTCAAGCTGGCTTACAATCTACTAAGGCGTGCTGATGGAACGTTCAATCGAGAGTTAGCGGAATTCCTGGACCGCAAGGTCCCGGCTAATACCATTCCTGTTGACGGGGTATTCTCTTTTGATCATGTCGAACGAAGCACCGGGCTCTTCAATAGGGTGTATCAAGTAGCTCCTGAAAACATGGGAAGGTTCATAGAGTTGGAGAAGCCCTTGAGCACCACAAAGATTGTTCCTGTTATAATTTTCTTCCATGGTGGAAGCTTCTCTCATTCATCTGCGAACAGTGCTATATATGACATCTTCTGCCGCCGCCTTGTAAGCAATTGCAAGGCTGTGGTGGTTTCTGTGAATTACAGGCGATCACCGGAATATCGGTATCCTTGTGCCTATGATGATGGCTGGTCTGCACTTAACTGGGTTAAATCAAGGACATGGCTTCAGAGTGGAAAGGATTCCAAGGTTCATGTGTACTTGGCTGGGGATAGTTCAGGTGGTAACATTGCTCATCATGTTGCTGTGAGGGCTGCTGAGGAAGATATTGAGGTGCTAGGTAATATTCTTCTCCACCCACTGTTTGGTGGGGAGAAACGAACCGAGTCAGAGATGAAACTGGATGGGAAGTACTTTGTGAGGCTGCAGGACCGTGATTGGTATTGGAGAGCTTTTCTTCCCGAAGGGGCGGATCGAGATCACCCGGCTTGTAACCCGTTCGGCCCCAAGGGTAAAAATCTTCAAGGACTCAAGTTGCCCAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTCTCCAAGATTGGCAACTGGAATATGTGGAAGGTCTCAAGAATTGTGGCCAAGATGTCAAACTTCTATACCTAAAGGAGGCAACTATTGGTTTCTACTTCTTGCCTAATAATGATCATTTCTATACCCTCATGGAGGAGATAAAGAACTTCGTCAACCCTAACTGTTAA 1032 0.4564 MTESNNEVNLSESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVERSTGLFNRVYQVAPENMGRFIELEKPLSTTKIVPVIIFFHGGSFSHSSANSAIYDIFCRRLVSNCKAVVVSVNYRRSPEYRYPCAYDDGWSALNWVKSRTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPLFGGEKRTESEMKLDGKYFVRLQDRDWYWRAFLPEGADRDHPACNPFGPKGKNLQGLKLPKSLVCVAGLDLLQDWQLEYVEGLKNCGQDVKLLYLKEATIGFYFLPNNDHFYTLMEEIKNFVNPNC 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00220 343 Gene3D alpha/beta hydrolase 1 340 IPR029058 -
Gma10g00220 343 SUPERFAMILY alpha/beta-Hydrolases 100 340 IPR029058 -
Gma10g00220 343 Pfam alpha/beta hydrolase fold 107 320 IPR013094 GO:0016787
Gma10g00220 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 107 123 IPR002168 GO:0016787
Gma10g00220 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 183 195 IPR033140 -
Gma10g00220 343 PANTHER ARYLACETAMIDE DEACETYLASE 4 340 - -
Gma10g00220 343 PANTHER GIBBERELLIN RECEPTOR GID1B 4 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00220 Gma-Chr10 2031734 2033444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00220 6 340 Carbohydrate Esterase AT3G63010 74.852 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00220 K14493 - gmx:100812133 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00220 10 2031734 2033444 Gma10g00220 10 2031734 2033444 ECH
Gma02g01377 02 15936045 15939331 Gma10g00220 10 2031734 2033444 ECH
Gma10g00220 10 2031734 2033444 Gma02g01377 02 15936045 15939331 GST
Gma19g01431 19 43583049 43586101 Gma10g00220 10 2031734 2033444 PCT
Gma03g01365 03 39830626 39832109 Gma10g00220 10 2031734 2033444 PCT
Gma10g00220 10 2031734 2033444 Gma19g01431 19 43583049 43586101 PCT
Gma10g00220 10 2031734 2033444 Gma03g01365 03 39830626 39832109 PCT