Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00218 ATGGGGTCGAAACCGTGGCTGTACCCTGCTCCAACCTATCGAACTATAGAAACTGTCTGGGACACCGATGAAGACGCTCCTGGCCCTCGTTGTGGCCACACCCTCACCGCCGTCGCTGCCACCAAGACTCTAGGCCCCCGCTTGATCTTATTCGGCGGCGCCACCGCCATTGAAGGAGGATCTTCCTCCGCTCCCGGCATTCGATTAGCAGGAGTCACGAATACCGTCCATGCCTATGACGTTCAAAGTAGAAAATGGACTAGTGTTAAACCCGCCGGAGAACCGCCATCTCCCCGGGCTGCTCATGCCGCTGCTGCAGTTGGAACCATGGTTGTTTTTCAGGGTGGGATAGGTCCGGCGGGGCATTCTACCGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGGGTCGTTGTACAAGGGCAAGGACCTGGTCCACGCTATGGCCATGCAATGGACTTGGTTGCTCAGAGATATCTAGTAACTGTCAGCGGAAATGACGGGAAAAGAGTTGTATCTGATGCTTGGGCTTTGGATACTGCTCAAAAACCTTATGTGTGGCAGAAGCTGAACCCAGAAGGTGACAGACCTTCTGCCAGAATGTACGCAACTGCTAGTGCTCGCTCAGATGGAATGTTTTTACTCTGTGGTGGAAGAGACTCTTCTGGAGCTCCACTAGCAGATGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCACCGGGAGTTTCCCCTTCACCTAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTACATGTTACAGGAGGTGTTCTCAGGGGTGGACGGTCCGTGGAAGGTGAAGCATCCATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGACAGAAATGGCATTGTGTCCTCCTCACGCTCAAACAAAGGTCATGATTATGACCCTCCTTTGGAGCTTATGCGTCGTTGTCGCCATGCAGCAGCAGCTGTTGGTGTTCATATATTTATCTATGGTGGTCTAAGAGGAGATATACTACTAGATGATTTCCTAGTGGCTGAAAATTCGCCATTGCAGCCTGACATTAATTCTTCTGAGAGAGCTTCACCTGTTACAAGCTCCAAACAAAATCAATCTAACTTGACTTATAATGTAACAGCACCAAATTTGGATGGTGGACCAGATACTCCTTCATTTGGTCACTCAGGCATGGACAAAAATTCCTTGGAGAAACTGAGGGAAGCATCAGCTGCTGAAGCTGAGGCAGCGAGTGCTGTCTGGCAAGCTGTGCAGTCTATATCAAGTAATCCAGCTGAAGAAACATCTCTGTCAGATGAAAACTCACAAGCTGCAGAAACAGTTTCAGATGGAAGTGACACTGAGGGAGATGTCCGCCTTCATCCTAGAGCCGTTGTAGTTGCCAAGGAGGCTGTAGGTAACCTAGGTGGAATGGTGAGACAATTATCGCTAGATCAATTTGAAAATGAAAGCAGACGCATGATTCCAGTAAATAATGATTTGCCATATCCTACGAAAAAGTTCACCAGGCAGAAATCTCCTCAGGGTTTACATAAAAAGATAATTTCAACTTTGCTTAGGCCTCGCAACTGGAAAGCTCCTGCAAACAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAACTTTGCTATGCTGCCGAGCAAATATTTATGCATGAACCAACCGTTCTTCAGCTTAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCTACTGCAGGAGACATCACCTATATTGACTACCTGTTTTTGGGAGATTACGTTGATCGAGGACAGCATAGCTTGGAAACCATTACCTTGCTACTTGCTCTTAAGATCGAATATCCTGAGAATGTTCACTTGATACGGGGAAACCACGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGGATTGAGTGCATTGAAAGAATGGGTGAAAATGATGGGATATGGGCATGGACACGATTCAATCAACTATTTAATTATCTTCCATTAGCTGCTCTTATTGAAAAGAAAATTATCTGCATGCATGGTGGCATTGGAAGATCTATCAATTCAGTAGAAGATATAGAGAAGCTCAAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTTTTATGGTCTGATCCCACAGAGAATGATAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGCCCAGGGCTTGTCACTTTTGGGCCTGATCGTGTCACAGAATTTTGTAAGAAAAATAAATTGCAGCTCATTATAAGGGCCCATGAGTGTGTCATGGATGGTTTTGAACGATTTGCCCAGGGACAATTAATCACCCTTTTTTCTGCAACCAACTATTGTGGAACTGCGAACAATGCGGGAGCTATACTGGTAGTTGGTAGGGGTTTGGTTGTGGTTCCAAAATTAATTCATCCCATACCACCTCCCCTTCAGTCTCCTGAGACATCTCCTGAGCGTGGTATGGATGAGACATGGATGCAGGAGCTCAATATTCAGAGGCCACCAACTCCTACTCGGGGTCGACCACAGCCTGACCTTGATCGTGGCTCACTAGCATACATATGA 2646 0.4637 MGSKPWLYPAPTYRTIETVWDTDEDAPGPRCGHTLTAVAATKTLGPRLILFGGATAIEGGSSSAPGIRLAGVTNTVHAYDVQSRKWTSVKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHAMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIAVLDTAAGVWLDRNGIVSSSRSNKGHDYDPPLELMRRCRHAAAAVGVHIFIYGGLRGDILLDDFLVAENSPLQPDINSSERASPVTSSKQNQSNLTYNVTAPNLDGGPDTPSFGHSGMDKNSLEKLREASAAEAEAASAVWQAVQSISSNPAEETSLSDENSQAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPVNNDLPYPTKKFTRQKSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVEDIEKLKRPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPLQSPETSPERGMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00218 881 Pfam Galactose oxidase, central domain 115 157 - -
Gma10g00218 881 Pfam Galactose oxidase, central domain 29 96 - -
Gma10g00218 881 MobiDBLite consensus disorder prediction 834 881 - -
Gma10g00218 881 ProSitePatterns Serine/threonine specific protein phosphatases signature. 647 652 IPR006186 GO:0016787
Gma10g00218 881 PRINTS Serine/threonine phosphatase family signature 578 605 IPR006186 GO:0016787
Gma10g00218 881 PRINTS Serine/threonine phosphatase family signature 613 640 IPR006186 GO:0016787
Gma10g00218 881 PRINTS Serine/threonine phosphatase family signature 646 670 IPR006186 GO:0016787
Gma10g00218 881 PRINTS Serine/threonine phosphatase family signature 684 710 IPR006186 GO:0016787
Gma10g00218 881 PRINTS Serine/threonine phosphatase family signature 714 741 IPR006186 GO:0016787
Gma10g00218 881 PRINTS Serine/threonine phosphatase family signature 774 794 IPR006186 GO:0016787
Gma10g00218 881 PRINTS Serine/threonine phosphatase family signature 796 812 IPR006186 GO:0016787
Gma10g00218 881 Pfam Calcineurin-like phosphoesterase 578 785 IPR004843 GO:0016787
Gma10g00218 881 SMART pp2a_7 550 834 IPR006186 GO:0016787
Gma10g00218 881 Gene3D - 10 194 IPR015915 GO:0005515
Gma10g00218 881 MobiDBLite consensus disorder prediction 434 466 - -
Gma10g00218 881 Pfam Serine-threonine protein phosphatase N-terminal domain 529 576 IPR031675 -
Gma10g00218 881 Gene3D - 195 385 IPR015915 GO:0005515
Gma10g00218 881 MobiDBLite consensus disorder prediction 360 394 - -
Gma10g00218 881 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 881 - -
Gma10g00218 881 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 881 - -
Gma10g00218 881 SUPERFAMILY Kelch motif 70 357 IPR015915 GO:0005515
Gma10g00218 881 MobiDBLite consensus disorder prediction 360 408 - -
Gma10g00218 881 PIRSF STPPP_BSU1 1 881 IPR012391 GO:0004721|GO:0009742
Gma10g00218 881 MobiDBLite consensus disorder prediction 434 459 - -
Gma10g00218 881 CDD MPP_Bsu1_C 530 832 IPR041758 -
Gma10g00218 881 Gene3D - 512 843 IPR029052 -
Gma10g00218 881 SUPERFAMILY Metallo-dependent phosphatases 531 842 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00218 Gma-Chr10 1999077 2009745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00218 579 777 Calmodulin-binding Proteins AT5G63870 32.609 7.10e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00218 K01090 - gmx:100809465 1749.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00218 10 1999077 2009745 Gma10g00218 10 1999077 2009745 ECH
Gma10g00218 10 1999077 2009745 Gma02g01379 02 15958602 15969353 GST