Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00194 ATGGGTGACAACATAGGCAAAGTCTTAGACAGAGAAGGCTTTAAGTACAACTTCACAGCTTCAGCAAGTGGCACATCTGCACAAGATGGGGTGATTAAGGAGCAAGATCGGTTGCTTCCAATAGCTAATGTGGGGCGCATCATGAAGCAAATCCTTCCTCCCAACGCCAAGATCTCAAAGGAAGCTAAAGAAACCATGCAAGAAAGTGTGTCCGAGTTCATTAGCTTTGTCACTGGGGAAGCTTCTGACAAGTGTCACAAGGAGAAGCGCAAGACCGTGAATGGTGACGATATTTGCTGGGCCCTTGCTACTTTAGGGTTTGATGACTACTCTGAGCCACTTAAAAGGTCAAATTTCTAG 360 0.4583 MGDNIGKVLDREGFKYNFTASASGTSAQDGVIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQESVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYSEPLKRSNF 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00194 119 SUPERFAMILY Histone-fold 35 116 IPR009072 GO:0046982
Gma10g00194 119 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 38 102 IPR003958 -
Gma10g00194 119 Gene3D Histone, subunit A 28 118 IPR009072 GO:0046982
Gma10g00194 119 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 16 116 - -
Gma10g00194 119 PRINTS CCAAT-binding transcription factor subunit A signature 85 103 - -
Gma10g00194 119 PRINTS CCAAT-binding transcription factor subunit A signature 104 119 - -
Gma10g00194 119 PRINTS CCAAT-binding transcription factor subunit A signature 66 84 - -
Gma10g00194 119 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 16 116 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00194 Gma-Chr10 1776009 1776525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00194 16 116 CCAAT-HAP3 Transcription Factor Family AT2G47810 69.828 5.31e-53 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma10g00194 CBFD_NFYB_HMF 6.9e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00194 K08065 - gmx:100796514 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00194 10 1776009 1776525 Gma10g00194 10 1776009 1776525 ECH
Gma02g01402 02 16200093 16200873 Gma10g00194 10 1776009 1776525 ECH
Gma10g00194 10 1776009 1776525 Gma02g01402 02 16200093 16200873 GST