Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma10g00194 | ATGGGTGACAACATAGGCAAAGTCTTAGACAGAGAAGGCTTTAAGTACAACTTCACAGCTTCAGCAAGTGGCACATCTGCACAAGATGGGGTGATTAAGGAGCAAGATCGGTTGCTTCCAATAGCTAATGTGGGGCGCATCATGAAGCAAATCCTTCCTCCCAACGCCAAGATCTCAAAGGAAGCTAAAGAAACCATGCAAGAAAGTGTGTCCGAGTTCATTAGCTTTGTCACTGGGGAAGCTTCTGACAAGTGTCACAAGGAGAAGCGCAAGACCGTGAATGGTGACGATATTTGCTGGGCCCTTGCTACTTTAGGGTTTGATGACTACTCTGAGCCACTTAAAAGGTCAAATTTCTAG | 360 | 0.4583 | MGDNIGKVLDREGFKYNFTASASGTSAQDGVIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQESVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYSEPLKRSNF | 119 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma10g00194 | 119 | SUPERFAMILY | Histone-fold | 35 | 116 | IPR009072 | GO:0046982 | |
Gma10g00194 | 119 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 38 | 102 | IPR003958 | - | |
Gma10g00194 | 119 | Gene3D | Histone, subunit A | 28 | 118 | IPR009072 | GO:0046982 | |
Gma10g00194 | 119 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 | 16 | 116 | - | - | |
Gma10g00194 | 119 | PRINTS | CCAAT-binding transcription factor subunit A signature | 85 | 103 | - | - | |
Gma10g00194 | 119 | PRINTS | CCAAT-binding transcription factor subunit A signature | 104 | 119 | - | - | |
Gma10g00194 | 119 | PRINTS | CCAAT-binding transcription factor subunit A signature | 66 | 84 | - | - | |
Gma10g00194 | 119 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 16 | 116 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma10g00194 | Gma-Chr10 | 1776009 | 1776525 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma10g00194 | 16 | 116 | CCAAT-HAP3 Transcription Factor Family | AT2G47810 | 69.828 | 5.31e-53 | 162 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YB | Gma10g00194 | CBFD_NFYB_HMF | 6.9e-27 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma10g00194 | K08065 | - | gmx:100796514 | 234.958 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma10g00194 | 10 | 1776009 | 1776525 | Gma10g00194 | 10 | 1776009 | 1776525 | ECH | |
Gma02g01402 | 02 | 16200093 | 16200873 | Gma10g00194 | 10 | 1776009 | 1776525 | ECH | |
Gma10g00194 | 10 | 1776009 | 1776525 | Gma02g01402 | 02 | 16200093 | 16200873 | GST |