Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00187 ATGGTCGAAACCAGACGCGGCGCCTCTTCTTCCAAGCGTTCTCTCTCTTCGCCTTCTTCTGCGTCCAACACCAAACGATCCAAGGTGTCTGAGGATTCCTCTGTGGCGGCTCCGGTCAACGAATCTGGAACCGGAAATGAATCTGGGGAACCGGAGCTACGACCCTCTGATCTGCCAGATACGGCGTCGTTGAAGGTCGCGGGTGTTTGTGATAAGTCTCCTTCTGAAGGCGAGGCTTTGGTGCCTCCACTGTGTGCAGGTGAAACTGCGGAGAAATCGAAGGTGGCTGGTCTTCCCCCAAGGAGCGTGAAGAAACGTGCTGCGAAATCGTGCCCCAAGACTGCATGGGGAAAGCTTCTCTCTCAGTGTTCTAAGACTCCTCATGTGTGCATGACTGAACCTTTCTTCACCGTTGGTCAAGGACGACATTGTAATTTATGGCTTAAAGATCCCACCATTGGTAGTGTTTTGTGCAAGCTGAGCCACATAGAGCGTGGAGGTTCATCGGGTGCATTACTGGAAATCACAGGGGGAAAAGGTTCTATTCACGTTAATGGAAAGACTTATAGAAAGAATGCCCGCCTAATTTTAAGTGGAGGTGATGAGGTTGTCTTTGGTTCTTCTGCCAAGTATGCTTATATCTTTCAGCAGCTGTCAAATAGTAATATTAGTACTGCTGATATAGCTTCTTCCGTGAGTATTTTGGAAGCCCAGAGTGCTCCATTAAATGGAATGCAAGTTGAAGCCAGATCTGGAGACCCTTCTGCTGTTGCTGGAGCATCTATATTGGCATCTTTATCTAATAATATTTGTAAAGAATTATCTCTCCTACCACCTGCTGCTAAAACTGGCAAGAATGTGCAGAACACTGACATTTCATCACTACATTCTGGCTGCGGGGATGATATCCCAGACAATGAAATGAATGATACCACCAATAATGCTGAACCAGCTGGAGATTTTTCTGCTGATAAAACTGTTCTTGCATCCTCTACCACTGTTAACGAAAATCCTAACCTTGACTCAGTGGAAGTCGATACCAATATTGATGCAAATGTTGGGAAGATGACTGCTGCTGCATATGAGTTGAGGCCATTACTGCGCATGCTTACTGGATCATGTCCTGAATTTGATTTAAGTGGTAGCATTTCCAAGATATTGGAAGGGCGAAGGGAATTAAGAGAACTTCTTAAAGATGTTGATACCCCAACAGTATTGGCATCAACCAAGCGGGAAGCATTTAAGGACATTTTACAGCAGAGAATTCTCATAGCTGAGAAGATTGATGTCTCATTTGAAACTTTTCCATATTATCTAAGTGATACTACAAAGAACGTCTTGATTGCTTCTACATTTATTCATTTGAAGTGCAATGGCTTTGGAAAATATGCTTCAGACCTCCCATCCGTGTCGCCACGAATTTTGTTATCTGGTCCTGCAGGTAGTTCAGAAATATACCAGGAGACTTTGTCCAAGGCACTTGTGAAGCATTTTGGTGCCAGACTACTAATTGTGGATTCTCTTTCACTGCCTGGTGGATCACCATCAAAGGAAGTTGATTCTGCCAAAGAAAGTTATTGTGCTGAAAAACCATCTGTGTTTTCTAGGAAGAAAAATCTCCATACTGCCATGTTACAACATAAGAAACCAGCCTCTAGTGTTAATGCTGAAATTATTGGGGGACCCATGCTTATTTCTAGTGCATCATCAAAAGGCACTACTCTTAAAAAGGGTGATCGAGTAAAATTTATTGGTAGCTTTCCTTCTGCTGTCTCATCGTTACCAAATTATATTTCAAGGGGACCAAGCTATGGCTCCCGGGGCAAAGTTCTCCTAGCTTTTGAAGATAACGGGTCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCAGATGGCAATGATCTTGGTGGCCTTTGTGAAGATGACCGTGGGTTCTTCTGTTCTGCAAATCATTTACTACGAGTAGACGGCTCTGGAGGGGATGATCTTGACAAAGTTGCAATTAATGAAATCTTTGAGGTTGTCTCTAATCAGAGTAAAAGTGGTGCACTCGTGTTGTTCATTAAAGATATAGAGAAGGCAATGATTGGCAACTATGAAATTTTAAAAAGTAAATTTGAAAGCTTGCCACCAAATGTTGTGGTAGTTGGTTCTCACACCCAGTTGGATAATCGTAAGGAGAAGACTCAACCCGGCAGTCTTCTGTTTACCAAGTTTGGAAGCAATCAGACAGCACTGCTTGATCTTGCTTTTCCGGATAACTTTAGTAGACTGCATGATAGAAGCAAAGAAATCTCAAAAGTTATGAAGCAACTTAGTCGCCTTTTTCCAAACAAAGTGACCATACAGTTGCCTCAGGACGAGGCTTTACTCTCTGACTGGAAGCAGCAGTTAGATTGTGACATTGAAACTATGAAAGCTCAGTCCAATGTTGTCAGCATTCGCTTAGTTCTTGGCAGAATTGGATTGGATTGCCCTGACCTTGAGACTCTCTGCATCAAAGACCACACCCTAACGACTGAGAGTGTGGAGAAGATCATTGGATGGGCTATAAGTTACCATTTTATGCATTCATCTGAAGCTTCAATCAGAGATTCTAAGCTTGTAATATCTGCAGAAAGCATTAAGTATGGACATAATATTCTACAGGGCATTCAAAATGAGAACAAGAACATGAAAAAATCACTTAAGGATGTGGTTACTGAGAATGAATTTGAGAAAAAACTACTTACTGATGTTATTCCACCGACTGATATTGGGGTCACATTTGATGATATTGGAGCTTTAGAAAATGTTAAGGAAACCTTGAAGGAATTAGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTTGGCAAAGGACAGCTGGCTAAGCCTTGCAAAGGAATATTGCTTTTTGGCCCTCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCTGGAGCAAATTTTATTAACATTTCAATGTCCAGCATTACGTCCAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTCATGGTTAATTGGGATGGTTTGCGAACAAAAGATAAAGAGCGTATACTTGTTCTTGCGGCTACAAATAGACCTTTTGATCTTGATGAGGCTGTTATTAGGAGACTTCCACGAAGATTGATGGTTAATTTGCCCGATGCTCCAAACAGAGAAAAAATTGTTAGTGTTATTTTAGCAAAAGAAGAATTGGCACCTGATGTTGATTTCGAAGCAATAGCAAATATGACTGATGGATATTCTGGGAGTGACCTAAAGAATCTATGTGTCACAGCAGCTCACTGTCCAATAAGAGAGATCTTGGAGAAGGAAAAGAAGGAGAGAAGCTTAGCATTGACTGAGAACCAACCATTACCTCAGTTGTGTAGCAGTACCGACATTCGTCCCTTAAAGATGGAAGATTTTATATATGCACATGAGCAG 3570 0.4182 MVETRRGASSSKRSLSSPSSASNTKRSKVSEDSSVAAPVNESGTGNESGEPELRPSDLPDTASLKVAGVCDKSPSEGEALVPPLCAGETAEKSKVAGLPPRSVKKRAAKSCPKTAWGKLLSQCSKTPHVCMTEPFFTVGQGRHCNLWLKDPTIGSVLCKLSHIERGGSSGALLEITGGKGSIHVNGKTYRKNARLILSGGDEVVFGSSAKYAYIFQQLSNSNISTADIASSVSILEAQSAPLNGMQVEARSGDPSAVAGASILASLSNNICKELSLLPPAAKTGKNVQNTDISSLHSGCGDDIPDNEMNDTTNNAEPAGDFSADKTVLASSTTVNENPNLDSVEVDTNIDANVGKMTAAAYELRPLLRMLTGSCPEFDLSGSISKILEGRRELRELLKDVDTPTVLASTKREAFKDILQQRILIAEKIDVSFETFPYYLSDTTKNVLIASTFIHLKCNGFGKYASDLPSVSPRILLSGPAGSSEIYQETLSKALVKHFGARLLIVDSLSLPGGSPSKEVDSAKESYCAEKPSVFSRKKNLHTAMLQHKKPASSVNAEIIGGPMLISSASSKGTTLKKGDRVKFIGSFPSAVSSLPNYISRGPSYGSRGKVLLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGGDDLDKVAINEIFEVVSNQSKSGALVLFIKDIEKAMIGNYEILKSKFESLPPNVVVVGSHTQLDNRKEKTQPGSLLFTKFGSNQTALLDLAFPDNFSRLHDRSKEISKVMKQLSRLFPNKVTIQLPQDEALLSDWKQQLDCDIETMKAQSNVVSIRLVLGRIGLDCPDLETLCIKDHTLTTESVEKIIGWAISYHFMHSSEASIRDSKLVISAESIKYGHNILQGIQNENKNMKKSLKDVVTENEFEKKLLTDVIPPTDIGVTFDDIGALENVKETLKELVMLPLQRPELFGKGQLAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKIVSVILAKEELAPDVDFEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSLALTENQPLPQLCSSTDIRPLKMEDFIYAHEQ 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00187 1190 Pfam AAA+ lid domain 1116 1152 IPR041569 -
Gma10g00187 1190 MobiDBLite consensus disorder prediction 1 62 - -
Gma10g00187 1190 CDD AAA 961 1094 - -
Gma10g00187 1190 Gene3D - 921 1094 IPR027417 -
Gma10g00187 1190 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1190 - -
Gma10g00187 1190 SUPERFAMILY SMAD/FHA domain 116 210 IPR008984 GO:0005515
Gma10g00187 1190 ProSitePatterns AAA-protein family signature. 1066 1085 IPR003960 GO:0005524|GO:0016887
Gma10g00187 1190 Coils Coil 883 903 - -
Gma10g00187 1190 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1190 - -
Gma10g00187 1190 SMART AAA_5 959 1096 IPR003593 -
Gma10g00187 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 922 1158 IPR027417 -
Gma10g00187 1190 CDD FHA 141 216 IPR000253 GO:0005515
Gma10g00187 1190 MobiDBLite consensus disorder prediction 1 49 - -
Gma10g00187 1190 Gene3D - 1095 1166 - -
Gma10g00187 1190 Pfam ATPase family associated with various cellular activities (AAA) 963 1092 IPR003959 GO:0005524|GO:0016887
Gma10g00187 1190 Gene3D - 115 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00187 Gma-Chr10 1710695 1722483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00187 958 1163 Calmodulin-binding Proteins AT3G56690 35.714 5.83e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00187 - - gmx:100794406 2291.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00187 10 1710695 1722483 Gma10g00187 10 1710695 1722483 ECH