Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma10g00184 | ATGTCTTCTGCGGCAGCTTCAACTTGGATCACGTCCTTCTCGTGTTCACCCAATGCAACTCcaaatttacctcactggctgagattcattttcctctctccgtgtcctcagagggctcttttgtctggtgttgacattcttctcctgttgactctctttgtgtttgcgctaataaagctctattctaggttcacttccattggcaaccacaactcagagctcgacaagccccttatcagaaacaacagagtttctaaccgaacaacagcatggtttaagttaactctaaccacaaccgctgtttggactattttgtacacggttgcttgcattctggtgtttaccagttccaccgatgggacgtggaagcaaactgatgggttcttttggttacttcaggctataacacaactagtccttgcagttttaatcatccatgagaaaaagtttcaagctgttgttcaccctttgtcgcttagaatatactggattgcaaatttcatcttggtttctttgttcacagcttctggggtcatacgtttggtctctgtgggagtggaagatgggaaacacttcagcttcctggttgatgacacggtttctttcatttctctacctttgtctctttttctgctttgcgttgctgttaaaggttccaccgggattgtgtccggggaagaaacacaacctcttattgatgaggaaacaaaactatatgacaaatccaacgttactggctttgcttcagcttctgcaatatccaaggccttttggatttggataaacccgttgctgagtaaagggtacaagtcaccgttgaagattgatgaaattccatacctttcacctcagcatagagctgagaggatgtcggtaatctttgaatcgaagtggcctaaatcagacgagaggtcaaagcacccagttcgaaccacgttgcttcggtgtttctggagggagatagccttcactgccttcctggctgttattaggctatctgtaatgtttgtagggccagttctaattcaaagttttgttgatttcacggcagggaaaggtagctctgtgtatgaagggtactacctcgtgttgattctcctgtgtgctaaattcgtagaagttttgacaactcaccatttcaacttcaactctcagaagcttgggatgcttatcagatgcaccctcatcacttctttgtacaagaaggggctgaggctaaccggttccgcgagacaggatcatggagttgggcctattgtcaattacatggctgtcgatagccagcaactctctgatatgatgcttcagttgcacgccgtgtggatgatgccatttcaagttggtattggtttgttcttgctgtacaactgtctaggagcctcagtgattacggctttacttggacttcttgctgttattgtatttgctgtggtgtctacaagaaagaacaagcgttaccagtttaatgccatgatgagccgtgattcaaggatgaaggcagtgaatgagatgctcaattacatgcgtgtcatcaagttccaagcatgggaggagcatttcaatgggaggattttgggtttccgaaagtccgagttccagtggctttccaagttcatgtactcaatctgtggcgttattattgtgttgtggagcacgccattgttgatatcaactctcacgtttggtactgcgcttttgcttggagttcgactcgatgcagggacggttttcaccaccacaactgtgtttaagatcctgcaggaacctattaggaccttccctcagagtatgatatctctttcacaagcgctggtgtcacttgggaggttggataggtacatgtctagcagggaattgatggatgattcggttgagagagaagaagggtgtggtggacacactgctgtggaggtcaaggatggaaccttcagctgggatgatgatggccaacttaaagacttgaaaaatattaacttgaagattaataagggggagcttacagcaattgttgggactgtaggctcagggaagtcttctctccttgcttcaattcttggcgagatgcacaaAATTTCTGGGAAGgttcaagtttgtgggagtactgcttatgttgcacaaacatcttggattcaaaatgggaccatcgaagagaacattatctttggtttaccaatgaacagacagaagtacaatgaagttgttagagtttgtagcttggagaaggacttggaaatgatggaacatggggaccagacagagattggagagcgcggaatcaacctaagtgggggtcagaagcagcgcatacagcttgccagggctgtgtatcaagactctgatatatatcttcttgatgatgtttttagtgctgttgatgcacacactggcactgaaatattcaagGAATGCGTGAGGGGGGCTCTGAAAGGCAAGACCGTTATTCTTGTTACACACCAAGTAGACTTCCTACATAATGTGGATCTTATAGTGGTGATGAGGGACGGAATGATAGTCCAATCGGGGAAGTACGATGATCTACTTGCGTCTGGAATGGATTTTAGTGCTCTTGTTGCAGCACATGACACCTCTATGGAACTAGTGGAGCAAGGTGCAGTCATTACTGGGGAAAATTTGAACAAGCCATTGAAATCACCAAAGGCAGCTTCGAATAACAGAGAAGCCAATGGTGAAAGCAACTCTCTTGACCAGCCCAAGTCTGGCAAGGAAGGTTCTAAACTCATCAAAGAGGAGGAGAGAGAGACTGGAAAAGTTAGCTTACATATCTATAAACTCTACTGCACTGAGGCTTTTGGGTGGTGGGGCATTATAGCAGTAATCTCTCTTTCTGTGTTGTGGCAAGCATCAATGATGGCAAGTGATTATTGGCTGGCATATGAAACATCAGAAGAGCGTGCTCAGTTGTTCAATCCTTCCATGTTTATTTCCATCTACGCGATTATTGCGGTAGTTTCAGTTGTTTTAATTGTGCTAAGATCCTACTCTGTCACAGTCCTGGGGTTAAAGACAGCACAGATTTTCTTCTCTCAAATTCTCCACAGCATCTTGCATGCCCCCATGTCTTTCTTTGACACCACGCCATCTGGGAGAATTCTAAGCAGGgcatccactgatcaaaccaatgttgatgtctttatccccttgttcatcaattttgtggtggctatgtacattacagtgatcagcatcttcataatcacgtgtcaaaattcttggccaacagctttcttgttaattcctcttgcttggttaaacatttggtaccggggttattttcttgcttcatctcgcgagttaactcgtctggattcaattacaaaagcaccagtgattcaccatttctctgaaagcatttccggggtcatgacaattcgcgcattcagaaagcagaaggaattttgcggagaaaacattaaacgggtgaatgctaatttgagaatggatttccacaacttcagttccaatgcgtggttgggtttccgcttagaattgcttggaagcttagttttttgcctttctgcaatgttcatgatcatgttacccagcagtatcataaagccagAAAATGTTGGTTTGTCTCTCTCATATGGCTTGTCATTAAATGCCGTGATGTTCTGGGCTATATACATGAGCTGTTTCATTGAAAACAAAATGGTATCTGTTGAGAGGATCAAACAGTTCACAAATATTCCATCGGAAGCTTCATGGAACATTAAGGATCGCCTGCCTCCTGCAAATTGGCCCGGGGAAGGCCATGTTGATATCAAAGACTTGCAGGTCAGATATCGTCCAAACACTCCTTTGGTTCTTAAAGGCATCACCCTAAGCATCAACggaggggaaaagattggagttgttggtcgaacaggaagtggaaaatcaactttaattcaagttttcttcaggctggtggaacctacaggaggaaaaataatcattgacggcattgacatatccgccttggggcttcatgatcttaggtcacggtttggtatcatccctcaggagcctgtcctttttgaaggaaccgtcagaagtaacattgatccaactggacagtacacagatgaagagatatggaagagtttggaacgttgtcaactaaaagatgcagtggcttctaagcctgagaaacttgacacttcagtggttgataatggagataactggagtgtggggcagaggcagttgctttgtttagggagggttatgcttaagcaaagcaggctgttgtttatggatgaggcaacagcttctgttgattcccaaaccgatgctgttattcagaagatcatcagagaggactttgcagctcgtaccatcatcagcattgctcatagaataccaacagtaatggactgtgatagagttctagttgtagatgcagggcgggccaaagaatttgattcaccagccaacttgctccaaaggccatctctctttggggcattagttcaagagtatgccaaccgttccagtggcctataa | 4506 | 0.1041 | MSSAAASTWITSFSCSPNATPNLPHWLRFIFLSPCPQRALLSGVDILLLLTLFVFALIKLYSRFTSIGNHNSELDKPLIRNNRVSNRTTAWFKLTLTTTAVWTILYTVACILVFTSSTDGTWKQTDGFFWLLQAITQLVLAVLIIHEKKFQAVVHPLSLRIYWIANFILVSLFTASGVIRLVSVGVEDGKHFSFLVDDTVSFISLPLSLFLLCVAVKGSTGIVSGEETQPLIDEETKLYDKSNVTGFASASAISKAFWIWINPLLSKGYKSPLKIDEIPYLSPQHRAERMSVIFESKWPKSDERSKHPVRTTLLRCFWREIAFTAFLAVIRLSVMFVGPVLIQSFVDFTAGKGSSVYEGYYLVLILLCAKFVEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLTGSARQDHGVGPIVNYMAVDSQQLSDMMLQLHAVWMMPFQVGIGLFLLYNCLGASVITALLGLLAVIVFAVVSTRKNKRYQFNAMMSRDSRMKAVNEMLNYMRVIKFQAWEEHFNGRILGFRKSEFQWLSKFMYSICGVIIVLWSTPLLISTLTFGTALLLGVRLDAGTVFTTTTVFKILQEPIRTFPQSMISLSQALVSLGRLDRYMSSRELMDDSVEREEGCGGHTAVEVKDGTFSWDDDGQLKDLKNINLKINKGELTAIVGTVGSGKSSLLASILGEMHKISGKVQVCGSTAYVAQTSWIQNGTIEENIIFGLPMNRQKYNEVVRVCSLEKDLEMMEHGDQTEIGERGINLSGGQKQRIQLARAVYQDSDIYLLDDVFSAVDAHTGTEIFKECVRGALKGKTVILVTHQVDFLHNVDLIVVMRDGMIVQSGKYDDLLASGMDFSALVAAHDTSMELVEQGAVITGENLNKPLKSPKAASNNREANGESNSLDQPKSGKEGSKLIKEEERETGKVSLHIYKLYCTEAFGWWGIIAVISLSVLWQASMMASDYWLAYETSEERAQLFNPSMFISIYAIIAVVSVVLIVLRSYSVTVLGLKTAQIFFSQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDVFIPLFINFVVAMYITVISIFIITCQNSWPTAFLLIPLAWLNIWYRGYFLASSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQKEFCGENIKRVNANLRMDFHNFSSNAWLGFRLELLGSLVFCLSAMFMIMLPSSIIKPENVGLSLSYGLSLNAVMFWAIYMSCFIENKMVSVERIKQFTNIPSEASWNIKDRLPPANWPGEGHVDIKDLQVRYRPNTPLVLKGITLSINGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDISALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDEEIWKSLERCQLKDAVASKPEKLDTSVVDNGDNWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDAVIQKIIREDFAARTIISIAHRIPTVMDCDRVLVVDAGRAKEFDSPANLLQRPSLFGALVQEYANRSSGL | 1501 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma10g00184 | 1501 | SUPERFAMILY | ABC transporter transmembrane region | 313 | 615 | IPR036640 | GO:0005524|GO:0016021 | |
Gma10g00184 | 1501 | Pfam | ABC transporter transmembrane region | 953 | 1187 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma10g00184 | 1501 | Pfam | ABC transporter transmembrane region | 323 | 589 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma10g00184 | 1501 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1252 | 1492 | IPR027417 | - | |
Gma10g00184 | 1501 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 634 | 857 | IPR027417 | - | |
Gma10g00184 | 1501 | MobiDBLite | consensus disorder prediction | 883 | 906 | - | - | |
Gma10g00184 | 1501 | CDD | ABCC_MRP_domain2 | 1257 | 1477 | - | - | |
Gma10g00184 | 1501 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 83 | 1500 | - | - | |
Gma10g00184 | 1501 | CDD | ABCC_MRP_domain1 | 636 | 835 | - | - | |
Gma10g00184 | 1501 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1259 | 1493 | IPR003439 | GO:0005524 | |
Gma10g00184 | 1501 | ProSitePatterns | ABC transporters family signature. | 761 | 775 | IPR017871 | GO:0005524 | |
Gma10g00184 | 1501 | MobiDBLite | consensus disorder prediction | 882 | 912 | - | - | |
Gma10g00184 | 1501 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 322 | 602 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma10g00184 | 1501 | SMART | AAA_5 | 1285 | 1469 | IPR003593 | - | |
Gma10g00184 | 1501 | SMART | AAA_5 | 663 | 844 | IPR003593 | - | |
Gma10g00184 | 1501 | CDD | ABC_6TM_ABCC_D2 | 942 | 1234 | IPR044726 | GO:0140359 | |
Gma10g00184 | 1501 | Gene3D | - | 615 | 875 | IPR027417 | - | |
Gma10g00184 | 1501 | CDD | ABC_6TM_ABCC_D1 | 323 | 610 | IPR044746 | GO:0140359 | |
Gma10g00184 | 1501 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 636 | 859 | IPR003439 | GO:0005524 | |
Gma10g00184 | 1501 | PANTHER | ABC TRANSPORTER C FAMILY MEMBER 4 | 83 | 1500 | - | - | |
Gma10g00184 | 1501 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 943 | 1222 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma10g00184 | 1501 | Gene3D | ABC transporter type 1, transmembrane domain | 906 | 1240 | IPR036640 | GO:0005524|GO:0016021 | |
Gma10g00184 | 1501 | Gene3D | ABC transporter type 1, transmembrane domain | 307 | 614 | IPR036640 | GO:0005524|GO:0016021 | |
Gma10g00184 | 1501 | Pfam | ABC transporter | 1276 | 1424 | IPR003439 | GO:0005524 | |
Gma10g00184 | 1501 | Pfam | ABC transporter | 654 | 787 | IPR003439 | GO:0005524 | |
Gma10g00184 | 1501 | SUPERFAMILY | ABC transporter transmembrane region | 939 | 1239 | IPR036640 | GO:0005524|GO:0016021 | |
Gma10g00184 | 1501 | Gene3D | - | 1242 | 1491 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma10g00184 | Gma-Chr10 | 1659058 | 1666830 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma10g00184 | 636 | 852 | Calmodulin-binding Proteins | AT2G36910 | 31.760 | 7.41e-26 | 114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma10g00184 | - | K05666 | gmx:100793361 | 2900.92 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma10g00184 | 10 | 1659058 | 1666830 | Gma10g00184 | 10 | 1659058 | 1666830 | ECH |