Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00184 ATGTCTTCTGCGGCAGCTTCAACTTGGATCACGTCCTTCTCGTGTTCACCCAATGCAACTCcaaatttacctcactggctgagattcattttcctctctccgtgtcctcagagggctcttttgtctggtgttgacattcttctcctgttgactctctttgtgtttgcgctaataaagctctattctaggttcacttccattggcaaccacaactcagagctcgacaagccccttatcagaaacaacagagtttctaaccgaacaacagcatggtttaagttaactctaaccacaaccgctgtttggactattttgtacacggttgcttgcattctggtgtttaccagttccaccgatgggacgtggaagcaaactgatgggttcttttggttacttcaggctataacacaactagtccttgcagttttaatcatccatgagaaaaagtttcaagctgttgttcaccctttgtcgcttagaatatactggattgcaaatttcatcttggtttctttgttcacagcttctggggtcatacgtttggtctctgtgggagtggaagatgggaaacacttcagcttcctggttgatgacacggtttctttcatttctctacctttgtctctttttctgctttgcgttgctgttaaaggttccaccgggattgtgtccggggaagaaacacaacctcttattgatgaggaaacaaaactatatgacaaatccaacgttactggctttgcttcagcttctgcaatatccaaggccttttggatttggataaacccgttgctgagtaaagggtacaagtcaccgttgaagattgatgaaattccatacctttcacctcagcatagagctgagaggatgtcggtaatctttgaatcgaagtggcctaaatcagacgagaggtcaaagcacccagttcgaaccacgttgcttcggtgtttctggagggagatagccttcactgccttcctggctgttattaggctatctgtaatgtttgtagggccagttctaattcaaagttttgttgatttcacggcagggaaaggtagctctgtgtatgaagggtactacctcgtgttgattctcctgtgtgctaaattcgtagaagttttgacaactcaccatttcaacttcaactctcagaagcttgggatgcttatcagatgcaccctcatcacttctttgtacaagaaggggctgaggctaaccggttccgcgagacaggatcatggagttgggcctattgtcaattacatggctgtcgatagccagcaactctctgatatgatgcttcagttgcacgccgtgtggatgatgccatttcaagttggtattggtttgttcttgctgtacaactgtctaggagcctcagtgattacggctttacttggacttcttgctgttattgtatttgctgtggtgtctacaagaaagaacaagcgttaccagtttaatgccatgatgagccgtgattcaaggatgaaggcagtgaatgagatgctcaattacatgcgtgtcatcaagttccaagcatgggaggagcatttcaatgggaggattttgggtttccgaaagtccgagttccagtggctttccaagttcatgtactcaatctgtggcgttattattgtgttgtggagcacgccattgttgatatcaactctcacgtttggtactgcgcttttgcttggagttcgactcgatgcagggacggttttcaccaccacaactgtgtttaagatcctgcaggaacctattaggaccttccctcagagtatgatatctctttcacaagcgctggtgtcacttgggaggttggataggtacatgtctagcagggaattgatggatgattcggttgagagagaagaagggtgtggtggacacactgctgtggaggtcaaggatggaaccttcagctgggatgatgatggccaacttaaagacttgaaaaatattaacttgaagattaataagggggagcttacagcaattgttgggactgtaggctcagggaagtcttctctccttgcttcaattcttggcgagatgcacaaAATTTCTGGGAAGgttcaagtttgtgggagtactgcttatgttgcacaaacatcttggattcaaaatgggaccatcgaagagaacattatctttggtttaccaatgaacagacagaagtacaatgaagttgttagagtttgtagcttggagaaggacttggaaatgatggaacatggggaccagacagagattggagagcgcggaatcaacctaagtgggggtcagaagcagcgcatacagcttgccagggctgtgtatcaagactctgatatatatcttcttgatgatgtttttagtgctgttgatgcacacactggcactgaaatattcaagGAATGCGTGAGGGGGGCTCTGAAAGGCAAGACCGTTATTCTTGTTACACACCAAGTAGACTTCCTACATAATGTGGATCTTATAGTGGTGATGAGGGACGGAATGATAGTCCAATCGGGGAAGTACGATGATCTACTTGCGTCTGGAATGGATTTTAGTGCTCTTGTTGCAGCACATGACACCTCTATGGAACTAGTGGAGCAAGGTGCAGTCATTACTGGGGAAAATTTGAACAAGCCATTGAAATCACCAAAGGCAGCTTCGAATAACAGAGAAGCCAATGGTGAAAGCAACTCTCTTGACCAGCCCAAGTCTGGCAAGGAAGGTTCTAAACTCATCAAAGAGGAGGAGAGAGAGACTGGAAAAGTTAGCTTACATATCTATAAACTCTACTGCACTGAGGCTTTTGGGTGGTGGGGCATTATAGCAGTAATCTCTCTTTCTGTGTTGTGGCAAGCATCAATGATGGCAAGTGATTATTGGCTGGCATATGAAACATCAGAAGAGCGTGCTCAGTTGTTCAATCCTTCCATGTTTATTTCCATCTACGCGATTATTGCGGTAGTTTCAGTTGTTTTAATTGTGCTAAGATCCTACTCTGTCACAGTCCTGGGGTTAAAGACAGCACAGATTTTCTTCTCTCAAATTCTCCACAGCATCTTGCATGCCCCCATGTCTTTCTTTGACACCACGCCATCTGGGAGAATTCTAAGCAGGgcatccactgatcaaaccaatgttgatgtctttatccccttgttcatcaattttgtggtggctatgtacattacagtgatcagcatcttcataatcacgtgtcaaaattcttggccaacagctttcttgttaattcctcttgcttggttaaacatttggtaccggggttattttcttgcttcatctcgcgagttaactcgtctggattcaattacaaaagcaccagtgattcaccatttctctgaaagcatttccggggtcatgacaattcgcgcattcagaaagcagaaggaattttgcggagaaaacattaaacgggtgaatgctaatttgagaatggatttccacaacttcagttccaatgcgtggttgggtttccgcttagaattgcttggaagcttagttttttgcctttctgcaatgttcatgatcatgttacccagcagtatcataaagccagAAAATGTTGGTTTGTCTCTCTCATATGGCTTGTCATTAAATGCCGTGATGTTCTGGGCTATATACATGAGCTGTTTCATTGAAAACAAAATGGTATCTGTTGAGAGGATCAAACAGTTCACAAATATTCCATCGGAAGCTTCATGGAACATTAAGGATCGCCTGCCTCCTGCAAATTGGCCCGGGGAAGGCCATGTTGATATCAAAGACTTGCAGGTCAGATATCGTCCAAACACTCCTTTGGTTCTTAAAGGCATCACCCTAAGCATCAACggaggggaaaagattggagttgttggtcgaacaggaagtggaaaatcaactttaattcaagttttcttcaggctggtggaacctacaggaggaaaaataatcattgacggcattgacatatccgccttggggcttcatgatcttaggtcacggtttggtatcatccctcaggagcctgtcctttttgaaggaaccgtcagaagtaacattgatccaactggacagtacacagatgaagagatatggaagagtttggaacgttgtcaactaaaagatgcagtggcttctaagcctgagaaacttgacacttcagtggttgataatggagataactggagtgtggggcagaggcagttgctttgtttagggagggttatgcttaagcaaagcaggctgttgtttatggatgaggcaacagcttctgttgattcccaaaccgatgctgttattcagaagatcatcagagaggactttgcagctcgtaccatcatcagcattgctcatagaataccaacagtaatggactgtgatagagttctagttgtagatgcagggcgggccaaagaatttgattcaccagccaacttgctccaaaggccatctctctttggggcattagttcaagagtatgccaaccgttccagtggcctataa 4506 0.1041 MSSAAASTWITSFSCSPNATPNLPHWLRFIFLSPCPQRALLSGVDILLLLTLFVFALIKLYSRFTSIGNHNSELDKPLIRNNRVSNRTTAWFKLTLTTTAVWTILYTVACILVFTSSTDGTWKQTDGFFWLLQAITQLVLAVLIIHEKKFQAVVHPLSLRIYWIANFILVSLFTASGVIRLVSVGVEDGKHFSFLVDDTVSFISLPLSLFLLCVAVKGSTGIVSGEETQPLIDEETKLYDKSNVTGFASASAISKAFWIWINPLLSKGYKSPLKIDEIPYLSPQHRAERMSVIFESKWPKSDERSKHPVRTTLLRCFWREIAFTAFLAVIRLSVMFVGPVLIQSFVDFTAGKGSSVYEGYYLVLILLCAKFVEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLTGSARQDHGVGPIVNYMAVDSQQLSDMMLQLHAVWMMPFQVGIGLFLLYNCLGASVITALLGLLAVIVFAVVSTRKNKRYQFNAMMSRDSRMKAVNEMLNYMRVIKFQAWEEHFNGRILGFRKSEFQWLSKFMYSICGVIIVLWSTPLLISTLTFGTALLLGVRLDAGTVFTTTTVFKILQEPIRTFPQSMISLSQALVSLGRLDRYMSSRELMDDSVEREEGCGGHTAVEVKDGTFSWDDDGQLKDLKNINLKINKGELTAIVGTVGSGKSSLLASILGEMHKISGKVQVCGSTAYVAQTSWIQNGTIEENIIFGLPMNRQKYNEVVRVCSLEKDLEMMEHGDQTEIGERGINLSGGQKQRIQLARAVYQDSDIYLLDDVFSAVDAHTGTEIFKECVRGALKGKTVILVTHQVDFLHNVDLIVVMRDGMIVQSGKYDDLLASGMDFSALVAAHDTSMELVEQGAVITGENLNKPLKSPKAASNNREANGESNSLDQPKSGKEGSKLIKEEERETGKVSLHIYKLYCTEAFGWWGIIAVISLSVLWQASMMASDYWLAYETSEERAQLFNPSMFISIYAIIAVVSVVLIVLRSYSVTVLGLKTAQIFFSQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDVFIPLFINFVVAMYITVISIFIITCQNSWPTAFLLIPLAWLNIWYRGYFLASSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQKEFCGENIKRVNANLRMDFHNFSSNAWLGFRLELLGSLVFCLSAMFMIMLPSSIIKPENVGLSLSYGLSLNAVMFWAIYMSCFIENKMVSVERIKQFTNIPSEASWNIKDRLPPANWPGEGHVDIKDLQVRYRPNTPLVLKGITLSINGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDISALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDEEIWKSLERCQLKDAVASKPEKLDTSVVDNGDNWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDAVIQKIIREDFAARTIISIAHRIPTVMDCDRVLVVDAGRAKEFDSPANLLQRPSLFGALVQEYANRSSGL 1501
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00184 1501 SUPERFAMILY ABC transporter transmembrane region 313 615 IPR036640 GO:0005524|GO:0016021
Gma10g00184 1501 Pfam ABC transporter transmembrane region 953 1187 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g00184 1501 Pfam ABC transporter transmembrane region 323 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g00184 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1492 IPR027417 -
Gma10g00184 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 634 857 IPR027417 -
Gma10g00184 1501 MobiDBLite consensus disorder prediction 883 906 - -
Gma10g00184 1501 CDD ABCC_MRP_domain2 1257 1477 - -
Gma10g00184 1501 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 83 1500 - -
Gma10g00184 1501 CDD ABCC_MRP_domain1 636 835 - -
Gma10g00184 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1259 1493 IPR003439 GO:0005524
Gma10g00184 1501 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524
Gma10g00184 1501 MobiDBLite consensus disorder prediction 882 912 - -
Gma10g00184 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 322 602 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g00184 1501 SMART AAA_5 1285 1469 IPR003593 -
Gma10g00184 1501 SMART AAA_5 663 844 IPR003593 -
Gma10g00184 1501 CDD ABC_6TM_ABCC_D2 942 1234 IPR044726 GO:0140359
Gma10g00184 1501 Gene3D - 615 875 IPR027417 -
Gma10g00184 1501 CDD ABC_6TM_ABCC_D1 323 610 IPR044746 GO:0140359
Gma10g00184 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 859 IPR003439 GO:0005524
Gma10g00184 1501 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 83 1500 - -
Gma10g00184 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1222 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g00184 1501 Gene3D ABC transporter type 1, transmembrane domain 906 1240 IPR036640 GO:0005524|GO:0016021
Gma10g00184 1501 Gene3D ABC transporter type 1, transmembrane domain 307 614 IPR036640 GO:0005524|GO:0016021
Gma10g00184 1501 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Gma10g00184 1501 Pfam ABC transporter 654 787 IPR003439 GO:0005524
Gma10g00184 1501 SUPERFAMILY ABC transporter transmembrane region 939 1239 IPR036640 GO:0005524|GO:0016021
Gma10g00184 1501 Gene3D - 1242 1491 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma10g00184 Gma-Chr10 1659058 1666830 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00184 636 852 Calmodulin-binding Proteins AT2G36910 31.760 7.41e-26 114
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00184 - K05666 gmx:100793361 2900.92
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00184 10 1659058 1666830 Gma10g00184 10 1659058 1666830 ECH