Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00174 ATGGTTCCCTTTTCCAGCATACTGGGGCACGAAAAGTGTGAAAGCTACTTAATTTTTGGCGGAGAAACTACCCTTGGAGATAATTTTCGGGCATTTTTTTACTTCCTTTGCCTTGCTTATTGTTTTATCGGATTATCGGCTATAACTGCTCGCTTTTTTCAATCGATGGAAAATGTGGTCAAGCACACAAGGAAGGTAGTGGAGGTAGATCCTGTTACTAAAACTGAAACTATTAGGCATGAAAAAGTTTGGAATTACACTATTGCGGATATTAGCTTGTTGGCCTTTGGAACTAGCTTTCCCCAGATATCATTAGCCACCATTGATGCTATACAAAACATAGGGAAGCTGTATGCTGGAGGTTTGGGACCCGGAACACTTGTTGGTTCTGCTGCATTTGACCTGTTCCCCATCCACGCTGTTTGTGTAGTAGTTCCAAAAGCAGGAGAGCTGAAGAAGATTGCTGATCTAGGAGTATGGCTGGTGGAGCTGTTTTGGTCATTTTGGGCTTACATTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTTGTGACTCTCTGGGAGGCATTGTTGACTGTACTGCAATACGGATTACTATTGACTCATGCTTATGCTCAAGACAAACGTTGGCCATATATTTCTCTACCTATTGCAAGAGATGAGAGGCCAGAGGATTGGGTGCCGGAAGAGACTCCTTATTTTCAACATGAAGCCCATGCGGAGGTGGATTTCTCTGATATAAAGCATGTTAATGAAGAAAATGGGGACACTGTTGATATTTTTTCCATTCATTCAGAAAACCCCACGGATCCATTATATGCCAGAGTACCTTCAATAAATGATGAGGCTGAAATTTTGGACAAAGCTAAGGAAACGACATTGGTGGATACACACTTGCTTACAATTTGGAGACAGCAATTTCTGGATGCACTGAGGTTGTTGAGACCAGAATCAAAAAAAATAAAAAATGCATGTCTCCGCTTAGCTTGTATTTTCTGGCAATTGCTGATTTTACCTTGGAGGTTTCTGTTTGCATTTGTTCCTCCATGCCAAATTGCTCATGGATGGATCTCCTTCATTTGCTCTCTGCTTTTCATCTCTGGGATAGCTTACGTTGTGACTAAGATCACAGATGTTATAAGTTGTGTCACAGGGATAAATGCTTACGTGATAGCATTTACAGCCCTAGCCAGTGGAACCTCATGGCCTGATCTAGTGGCAAGCAAAATTGCTGCAGAACGTCAAAAAACTGCTGATTCTGCAATTGCAAACATCACTTGCAGCAATTCAGTGAATATATATGTTGGTATTGGTGTTCCATGGCTTATTGATACTTTGTACAACTTCATAGCATATAGAGAACCTCTCCGAATCCAAAATGCAGGGGGACTAAGCTTTTCGTTGATTGTTTTCTTCTCCACTTCTGTCGGGTGTATCTCAGTTTTGGTTTTAAGGCGTATAATTTTTGGCGCAGAGCTAGGAGGGCCTAGGCTCTGGGCATGGATTACCTGTGCGTTCTTCATGTTGTTGTGGATTATTTTTGTTGTACTATCGTCACTCAAGGTTTCTGGATTCATTTAG 1587 0.4146 MVPFSSILGHEKCESYLIFGGETTLGDNFRAFFYFLCLAYCFIGLSAITARFFQSMENVVKHTRKVVEVDPVTKTETIRHEKVWNYTIADISLLAFGTSFPQISLATIDAIQNIGKLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVLQYGLLLTHAYAQDKRWPYISLPIARDERPEDWVPEETPYFQHEAHAEVDFSDIKHVNEENGDTVDIFSIHSENPTDPLYARVPSINDEAEILDKAKETTLVDTHLLTIWRQQFLDALRLLRPESKKIKNACLRLACIFWQLLILPWRFLFAFVPPCQIAHGWISFICSLLFISGIAYVVTKITDVISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQNAGGLSFSLIVFFSTSVGCISVLVLRRIIFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00174 528 Pfam Sodium/calcium exchanger protein 33 206 IPR004837 GO:0016021|GO:0055085
Gma10g00174 528 Pfam Sodium/calcium exchanger protein 357 520 IPR004837 GO:0016021|GO:0055085
Gma10g00174 528 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 272 528 - -
Gma10g00174 528 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 6 212 - -
Gma10g00174 528 PANTHER SODIUM/CALCIUM EXCHANGER 272 528 - -
Gma10g00174 528 PANTHER SODIUM/CALCIUM EXCHANGER 6 212 - -
Gma10g00174 528 Gene3D - 313 522 IPR044880 -
Gma10g00174 528 Gene3D - 86 220 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00174 Gma-Chr10 1600933 1605869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00174 5 528 Antiporters AT2G47600 72.264 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00174 K03452 K05849 gmx:100792839 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00174 10 1600933 1605869 Gma10g00174 10 1600933 1605869 ECH