Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00167 ATGGAAAGCAAAAGAAACTTGTTGTGGGTGATGGGCATATGCATGTGGTTGGTTCTAGCACATCACCGAAGCGGTGCGGCGGAAGAAAAAATAGGCAAGGAGCTAATTAAGAGCATATGCAAAAACAGGGGAAACAATGAATTGTGCATGCAGGTGCTTTCCTCGGACCCAGACAGTGATCACGCGGACCTAGAGGAGCTGGCAATGATATCTCTGAAGGCTGCGGCGTCAAATGCGAGCAGCATTCTAAATGATTGTAAGAGAATGATCGACGACCAGAATTTGGAACCTAAGGTTCAACAGGGTTTGGCTGATTGCAAGGAGAATCTGTTGGACGCAGAGAGTCAAATTCAGGATGCTATTGCGTCCATATTGTCCAATGACAAGCTTGATGCTCAGGTATGGCTCAAGGCTGCATTGGCTGCTATTGATacatgtgacgattctatccccggcgatgatgatattctctctAGAAAGAGTGTGGCGTTTCGCCAATTGTGCAACATTGCCGTCGCCATCAACAAGGCCATTTTGAGAAGTGATTATGGGAGTCATGATGGTGCCTATGAGCTGGACGCCTCACAAAAGGGACGGCGTAGGAGGTATGTGTTGACTAAGGTCAAGGAAATGACGGCTTGTGAAAGGGATCTTATGAAGGAGACGCTGCCGTTTTGGGGAGGGAAGAGGGAGTTGCAGAAGGATGGGTCGAATAATGAGGGGAGGAGGAGAAAGGTTGATATTGTTGGGAGGGAATTACGTAACTTGTTTGCCATTGGGAGGACTTGGTTAGATTGCTCATGA 804 0.4515 MESKRNLLWVMGICMWLVLAHHRSGAAEEKIGKELIKSICKNRGNNELCMQVLSSDPDSDHADLEELAMISLKAAASNASSILNDCKRMIDDQNLEPKVQQGLADCKENLLDAESQIQDAIASILSNDKLDAQVWLKAALAAIDTCDDSIPGDDDILSRKSVAFRQLCNIAVAINKAILRSDYGSHDGAYELDASQKGRRRRYVLTKVKEMTACERDLMKETLPFWGGKRELQKDGSNNEGRRRKVDIVGRELRNLFAIGRTWLDCS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00167 267 CDD PMEI-like_1 35 178 - -
Gma10g00167 267 Pfam Plant invertase/pectin methylesterase inhibitor 35 174 IPR006501 GO:0004857
Gma10g00167 267 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 177 - -
Gma10g00167 267 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 176 IPR035513 -
Gma10g00167 267 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 177 IPR006501 GO:0004857
Gma10g00167 267 SMART PMEI_2 31 174 IPR006501 GO:0004857
Gma10g00167 267 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 179 IPR035513 -
Gma10g00167 267 PANTHER PECTINESTERASE 1 177 - -
Gma10g00167 267 Coils Coil 103 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00167 Gma-Chr10 1545758 1547315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00167 10 156 Carbohydrate Esterase AT5G53370 29.299 9.30e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00167 - - gmx:100791255 353.599