Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00166 ATGGCCAACAACAAGTTAACCTTTGTCATCATCCTCATCTTCCTACCCTCATTGTTAGCTTTGGCTGACATCACTCCCAACACTTCCGTTTCTCCCGGAACCATATGCAAATCCACTCCAGACCCTTCTTATTGCAACTCCGTGCTACCTCCCCAAAACGGCAACGTTTACGAATATGGCAGGTTCTCGGTAAGAAAGTCCCTTTCACAGGCCACCAATTTCTTGAACTTAGTTAACAGATACCTCCAACTCCAACGCCGTTCTTCTCTTTCCACCCCCGCAATCCACGCGCTCGAAGATTGCCAAAGCCTCGCCGAACTCAACATAGACTTTCTCTCCAGTTCCTTAGAAACGGTGAACAGAACAACCAAATTTTTACCCACTTCACAGGCTGATGACATTCAAACTCTTTTAAGTGCCATTCTAACAAACCAACAAACATGCTTGGAAGGCCTTCAAGCCACCGCCTCCGCTTGGCGCCTCAAGAACGGACTCTCCGTTCCGCTCTCCAACGACACTAAGCTATACAGTGTCTCTCTGGCACTCTTCACAAAGGGGTGGGTCCCAGAAAATGCTAATGTCACCGCGTTTCAGCCAAGCGCCAAACATCGCGGGTTTCGAAACGGGCGTTTGCCGCTCAAGATGTCGAGCAGAACGCGCGCGATCTACGAGTCGGTGAGTCGGAGAAAGCTCCTGCAGGCGACGGTGGGTGACGAGGTTAAGGTGAAAGACATTGTGACGGTGAGCAAAGATGGAAACGGGAACTTCACCACCATCAGCGACGCCGTGGCCGCGGCGCCGAACAAGACTTCATCCACGGCGGGGTACTTCCTGATCTATGTGACCGCCGGTGTTTACGAGGAAAATGTTTCTATTGATAAGAAAAAGACGTACCTGATGATGGTGGGAGATGGCATCAACAAGACAATTATTACTGGAAATCGCAGTGTTGTTGATGGCTGGACAACCTTTAAGTCAGCGACATTTGCGGTGGTTGGAGCGAGATTCGTGGGTGTGAATATGACCATCCGCAACActgccggagcagagaagcaccaagctgtagcactccgcaacggcgcagacttgtccacgttttacagctgcagcttcgaagggtaccaagacacactgtacactcattcgctgcgacaattctacagagaatgcgacatctacggaaccgtcgatttcatattcggaaacgccgcggttgtgttccaaaactgcaacctctatcctcgtctcccaatgagtggccaattcaactccatcaccgcacaaggccgaaCCGACCCTAACCAAAACACCGGCACTTCAATCCACAACTGCACGATTCGACCAGCCGATGATTTGGCAGCGAACATCGATGCCGCTGAAACTTATCTGGGAAGGCCTTGGAAAAATTACTCCAGGACAGTTTACATGCAGAGCTTTATGGACACTGTCATCAATTCTGCTGGGTGGCGCGAATGGGACGGTGATTTTGCTCTGAGCACTCTTTACTATGCAGAGTTTAACAACACTGGACCTGGATCTACCACTGCCAATAGAGTCACGTGGCCGGGTTACCACGTCATTAATGCCACTGTTGCTGCTAATTTTACCGTCGCTAATTTCTTGCTTGGAGATAACTGGCTGCCCCAGACCGGAGTGCCTTACGCCAGTAACTTGATATAG 1680 0.4232 MANNKLTFVIILIFLPSLLALADITPNTSVSPGTICKSTPDPSYCNSVLPPQNGNVYEYGRFSVRKSLSQATNFLNLVNRYLQLQRRSSLSTPAIHALEDCQSLAELNIDFLSSSLETVNRTTKFLPTSQADDIQTLLSAILTNQQTCLEGLQATASAWRLKNGLSVPLSNDTKLYSVSLALFTKGWVPENANVTAFQPSAKHRGFRNGRLPLKMSSRTRAIYESVSRRKLLQATVGDEVKVKDIVTVSKDGNGNFTTISDAVAAAPNKTSSTAGYFLIYVTAGVYEENVSIDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFKSATFAVVGARFVGVNMTIRNTAGAEKHQAVALRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPMSGQFNSITAQGRTDPNQNTGTSIHNCTIRPADDLAANIDAAETYLGRPWKNYSRTVYMQSFMDTVINSAGWREWDGDFALSTLYYAEFNNTGPGSTTANRVTWPGYHVINATVAANFTVANFLLGDNWLPQTGVPYASNLI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00166 559 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Gma10g00166 559 Gene3D - 239 558 IPR012334 -
Gma10g00166 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 185 IPR035513 -
Gma10g00166 559 Pfam Pectinesterase 246 544 IPR000070 GO:0030599|GO:0042545
Gma10g00166 559 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 24 557 - -
Gma10g00166 559 CDD PMEI-like_3 34 187 - -
Gma10g00166 559 PANTHER PECTINESTERASE 24 557 - -
Gma10g00166 559 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 184 IPR006501 GO:0004857
Gma10g00166 559 SMART PMEI_2 27 182 IPR006501 GO:0004857
Gma10g00166 559 Pfam Plant invertase/pectin methylesterase inhibitor 34 182 IPR006501 GO:0004857
Gma10g00166 559 SUPERFAMILY Pectin lyase-like 243 556 IPR011050 -
Gma10g00166 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00166 Gma-Chr10 1539528 1542083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00166 1 559 Carbohydrate Esterase AT4G02330 64.286 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00166 K01051 - gmx:100790729 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00166 10 1539528 1542083 Gma10g00166 10 1539528 1542083 ECH