Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00155 ATTCGTAGTAATTCTCATAGAGGGCTCAGCGTACCAGATGCATGCCAAGTCCCAGTTTCATCAACAAAAGATGTTATTGAACTAATGAACCTGGGCCAAAGGAATCGTGCAGTTGGAGCAACAGCCCTTAATGACCGTAGTAGTCGATCACACAGTTGCTTGACTGTTCACGTTCAAGGAAGAGACTTGACTTCTGGAACTATCCTACGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGAGTTGACAAATCTGAGGCCACAGGAGATAGACTGAAAGAAGCACAGCACATTAACAGATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCATACAGAAATAGCAAACTCACACAGTTACTTCAAGATTCACTTGGAGGACAGGCCAAGACACTAATGTTTGTTCACATAAGTCCAGAGGTTGATGCTATTGGAGAAACAATTAGCACCTTAAAATTTGCAGAAAGAGTTGCAACAGTTGAACTTGGTGCTGCTCGAGTGAACAAGGATGGGGCAGCAGATGTCAAAGAGCTCAAAGAACAGATAGCCAGCCTCAAAGCAGCATTGGCAAGAAAGGAAGGTGAATCAGAACATTCTTTATCAGGTAGCTCTGAAAAATATAGGACAAGGGCTGGTGAGGTATCACCTTATCATGCAAACCAACGGGGTGCTGATATTGTGAGCCTAGGGTGCCGGCAACCAATGCTTGATGTAGGCAATATAGAGCTTCACAGTAATACCCCATTGAGACAAAAAACTCAGAGCTATGATTTTGATGAGATGTCGACGAATTCACCACCCTGGCCCCCATTGAATAATCTTGGACTAAACTATGGGGATGATGACAGAGAAACTGGTTCAGGAGAGTGGGTTGATAAAGTCATGGTAAACAAGCTAGATGCTACAAACAAAACTGAGAACATCTTAGGGTGTTGGGAAGCAGACAGTGGGAACTTATCTGAGGTATTTTATCAGAAGTATCTCCAAGATCCTTCCAAAATGGACCCAGAAAGATCCCACAACATGTTCATGGGAGGCAACAACCAGTTTAACGTTGCTGGTTCAGATGACATGGATGATCTTGATGATACAACCACTGATTCCTCGGAACCTGACTTGCTTTGGCAATTTAATCATTCCAAACTTGCCAGCATAGCCAATGGCAATGGTTCAAAGGCTAGGAGACCTGTCTCAAAGCCAACAAATAGCCCAATATTGAGCAAGAATAATGTTCATTCTTCTCTTGGTCCTTCACCTTCAAGGAAACAACAATCAAACGGTGTCAATCGAACAGCAAGACATCCAGCTCCAGTTGACATGAAACGTAAAACTGGGAGTAgaaagtaa 1380 0.4326 IRSNSHRGLSVPDACQVPVSSTKDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINRSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEVDAIGETISTLKFAERVATVELGAARVNKDGAADVKELKEQIASLKAALARKEGESEHSLSGSSEKYRTRAGEVSPYHANQRGADIVSLGCRQPMLDVGNIELHSNTPLRQKTQSYDFDEMSTNSPPWPPLNNLGLNYGDDDRETGSGEWVDKVMVNKLDATNKTENILGCWEADSGNLSEVFYQKYLQDPSKMDPERSHNMFMGGNNQFNVAGSDDMDDLDDTTTDSSEPDLLWQFNHSKLASIANGNGSKARRPVSKPTNSPILSKNNVHSSLGPSPSRKQQSNGVNRTARHPAPVDMKRKTGSRK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00155 459 Coils Coil 179 206 - -
Gma10g00155 459 PRINTS Kinesin heavy chain signature 121 142 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00155 459 PRINTS Kinesin heavy chain signature 41 58 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00155 459 PRINTS Kinesin heavy chain signature 72 90 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00155 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 204 IPR027417 -
Gma10g00155 459 MobiDBLite consensus disorder prediction 397 459 - -
Gma10g00155 459 ProSiteProfiles Kinesin motor domain profile. 1 171 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00155 459 Gene3D Kinesin motor domain 1 213 IPR036961 -
Gma10g00155 459 SMART kinesin_4 1 179 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00155 459 MobiDBLite consensus disorder prediction 405 442 - -
Gma10g00155 459 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 456 - -
Gma10g00155 459 Pfam Kinesin motor domain 1 170 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00155 459 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 456 - -
Gma10g00155 459 MobiDBLite consensus disorder prediction 356 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00155 Gma-Chr10 1460697 1463006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00155 1 171 Calmodulin-binding Proteins AT5G65930 47.953 1.03e-42 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00155 K10406 - gmx:100788073 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00155 10 1460697 1463006 Gma02g00149 02 1424792 1427388 GST
Gma19g02030 19 49243201 49250346 Gma10g00155 10 1460697 1463006 PCT
Gma03g01997 03 45602285 45607825 Gma10g00155 10 1460697 1463006 PCT
Gma10g00155 10 1460697 1463006 Gma19g02030 19 49243201 49250346 PCT
Gma10g00155 10 1460697 1463006 Gma03g01997 03 45602285 45607825 PCT