Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00154 ATGGCGGCATTTTCGTTTTCAGTTGCATCTGTGGTGGAAGATGTGCTTCAACAGCACGGTACTCGCCTCAAAGATCTTGACTTGGAATCTAGAAAAGCAGAAGAAGCTGCATCCAGAAGATATGAAGCAGCAGGGTGGCTGAGGAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTGCCAGCAGAGCCATCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTCTGTAATGTTCTTAATAAAGTTCAACCTGGTGCTGTACCCAAGGTCGTGGAGAGTCCTGCTGATTCTGCATTAGTCCCTGATGGAGCACCTTTATCGGCATTTCAGTATTTTGAAAATGTGAGGAACTTTCTGGTGGCTGTGCAGGAAATTGGAGTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCAGCCAGGATTGTGAACAGCGTCTTGGGTCTTAAGTCCTATAGTGAATGGAAACAGACTGGGGGTAATGGTGTGTGGAAATTTGGTGGAACTATCAAACCCGCAATCTCTTCAAAATCTTTTGTGAGAAAAACCTCTGAGCCATTTACTAATTCCTTGTCAAGGAACTCGTCTATCAATGAAAAATCCATGACTGTTCTTACCTCTGATGTTGAGTCTAATAAAATGTCTGGGTCTCATTCTTTGAGTATGCTTGTTCGTGCAATACTATTAGATAAGAAGCCTGAAGAAGTTCCATTGTTAGTTGAATCAGTCTTGAATAAGGTCGTAGAGGAGTTTGAGCAACGCATTGCCAGCCAGGGTGAACAGATAAAAATTTCAAGAGGTGCTGTGTCCCAAGGCAATGGATCTGTATCAAAGTTTGTTATGGCAGATAAAAAGATGGATAGCAAGATTCCTATGGTAACAAAGAAAGAAGGATTCTTCCATAAAAACCATGTTGATGATGTGGAATCGAAAAGACAACTTCTGAAGCAGCAAATGCTCTTTGATAATCAGCAAAGAGATATTCAAGAACTAAAGCATACAATTCACACCACCAAAGCTGGTATGCAGTTCCTGCAAATGAAGTTTCATGAGGAGTTCTCCAATCTAGGCAGGCATGTTCATAGCTTAGCTCATGCAGCTTCTGGATATCACAAAGTTCTTGAAGAAAATCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGAAGTATAAGGGTGTACTGTCGAGTAAGACCCTTCTTATCTGCACAACCAAATTATTCAAGCACAGTAGATAATATAGAAGATGGAACTATCACAATTAGTATTCCTTCAAAGAATGGGAAAGGGCGTAGATCCTTTAACTTCAACAAAGTCTTTGGACCATCTGCATCCCAAGCGGAGGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTTCTTGATGGTTACAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTCACACTATGACTGGACCAAAAGAGATCACAGAGAAAAGCAGAGGTGTAAACTACAGGGCTCTAAGTGATTTGTTTCTTACAGCAGATCAAAGAAGAGGCACTTTTTGCTATGATGTGTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGATCAAACAAAAGATATCCTTTTAGCT 1654 0.4075 MAAFSFSVASVVEDVLQQHGTRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPKVVESPADSALVPDGAPLSAFQYFENVRNFLVAVQEIGVPTFEASDLEQGGKSARIVNSVLGLKSYSEWKQTGGNGVWKFGGTIKPAISSKSFVRKTSEPFTNSLSRNSSINEKSMTVLTSDVESNKMSGSHSLSMLVRAILLDKKPEEVPLLVESVLNKVVEEFEQRIASQGEQIKISRGAVSQGNGSVSKFVMADKKMDSKIPMVTKKEGFFHKNHVDDVESKRQLLKQQMLFDNQQRDIQELKHTIHTTKAGMQFLQMKFHEEFSNLGRHVHSLAHAASGYHKVLEENRKLYNQVQDLKGSIRVYCRVRPFLSAQPNYSSTVDNIEDGTITISIPSKNGKGRRSFNFNKVFGPSASQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMTGPKEITEKSRGVNYRALSDLFLTADQRRGTFCYDVSVQMIEIYNEQVRDLLVTDGSNKRYPFS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00154 551 SMART kinesin_4 393 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00154 551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 547 IPR027417 -
Gma10g00154 551 ProSiteProfiles Kinesin motor domain profile. 395 551 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00154 551 Gene3D - 24 187 IPR036872 -
Gma10g00154 551 Pfam Calponin homology (CH) domain 38 158 IPR001715 GO:0005515
Gma10g00154 551 Coils Coil 16 36 - -
Gma10g00154 551 Pfam Microtubule binding 381 539 IPR031852 GO:0008017
Gma10g00154 551 SMART ch_5 39 157 IPR001715 GO:0005515
Gma10g00154 551 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 548 - -
Gma10g00154 551 Gene3D Kinesin motor domain 336 550 IPR036961 -
Gma10g00154 551 SUPERFAMILY Calponin-homology domain, CH-domain 35 170 IPR036872 -
Gma10g00154 551 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Gma10g00154 551 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00154 Gma-Chr10 1457399 1460566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00154 383 540 Calmodulin-binding Proteins AT5G65930 40.000 1.19e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00154 K10406 - gmx:100788073 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00154 10 1457399 1460566 Gma10g00154 10 1457399 1460566 ECH
Gma02g00148 02 1421403 1424661 Gma10g00154 10 1457399 1460566 ECH