Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma10g00134 | ATGATGGAAGCCACTTACCCATCGCCAATGTTTCGCGGTGTTCGTTTCGTTCTCCGTGGCTTCAATCCCGTCGCCCAAAACCAGATCCGGTTCAAGCTTGCCAATGGCGGTGGAGTCGACGTAGGACAGTACGGCGGGAGTTGCACGCATGTCATTGTCGATAACGTTGCTTATGACGATCCTGTGTGTGTTGCTGCCAGAAATGATCGGAAGACGGTTGTCACTGCATTGTGGGTTGAACACAGTGCTGATATTGGAATGCCTGTTGATGCTACTTCGGTTATGTACAGACCTCTTAAAGACTTAGATGGAATACCAGGTGCGAAAGATTTGATAATGTGCTTGACTGGTTATCTACGCCAGGATCGGGATGACATTATGACAATGGTTGGCCTAATGGGTGCACAGTTTTCTAAGCCTTTGGTGGCAAACAAGGTTACTCATCTCATATGCTACAAATTTGAAGGAGAGAAGTATGAGCTTGCCAAGAAATTGGGCACAATAAAGTTAGTTAATCATCGTTGGTTGGAAGATTGCTTGAAGGAATGGGTGCTTCTTCCCGAAGACAAATATAACAAGAGTGGTTTTGAACTAGAGATGATGGAGGAAGAGGCTAAGGATTCTGAGCAAGAGGCTGAAGATTCTAAGCTGGGACAATCAGGGGGAAGAAAAAGAAAACAAAGCCCCCTTAGTTCGAAAATTGGTATCGCTGCTACTCCTGGATTGTCCAAATCAGCAACAGAGGCATCAAACGCCTTACCAGATTCTACTGGTCCACAGGTCTTGCCAAATGTCAATAATGGTGAAAACTCTTTAACCGTTCCAGGAAATAAGAGCAGACCTGATCAAGGCTCGAGCTTTCATAATGTTGATGACTCAAAGGTAAGCTATCAGGCTGCTGATATTTCTAGACATTCTACATCATGCCAGTTACCTAACAAATATGTAAAGACCAGTGAGTCTAAGAATGCTGATTCTCCAAAGGCACCTGGCTGCCAGGATCTTGGCAATATGGGAAATACAAATTCATCTGATCAGCAGCCTGATCTGAATGGCGACATCTCAGAGTCTAAGAAGGTGGCAAGTGATTTGAGAGAAACTTCTGCAAGTGCTGCTGGAGTTGCACATTCAAATGAAAAGCTTAGAACTGCAAGTTATTCTAGGAAGAACCAAAAAGGATTTACTCTTCCAAGGATCTTAGATGAAAGCTCAGGTAGAGAAGGCAACAACTGTGATAACAGTAAGGTTCAAAAGGCCAGTGAGGGTGTCAAATCTACCAGTGTTGAAGTTTCTGGGAAAGGAAATGATTTTGTTAAAGATGAGCCAATTAGTTTATTGCCTCAAAAGAGGATAAACAAAGCTTCTTTTACTAAATTAAAATCAAGAAAGAAGACTTCAGTCCCATCAGCTAATGGTAAATCTCAAGGATTAAAAGTGACATCTCAGGTTGATGAGCCACCTGAAGCTGATGACTACTTTTCTATAGGTAAAGATGGTATAAATAACTCAAACACTTGCTTAGTTTCGAAACCTTCAGGCTCTACCTCCAACTCACTGGCATTTGATGAGCTTCTTTCAAGAAATGCAAGCCCAGAATCTGTTCAGTGTGATAATGTCTGTCAGAATTCATCAAAAATGGCTGTTCAGAGCTTAAGTGAGTCTAAAATTAATGGCAAACCTGATATCACAGGTTCTGGAATGCAACAAGTTGGTGGTAATGAAGTAGAGCAACATACTGTCACTAAAAATCTTGATTGTTCATCTCTGGGAAACAAAAAATCATGTAATGTGGAATCTGCTGGTTGTACTAAATTGGATTTAGGCACCGAAGAAAGTAATAAACTGGTTAGCAAATCACCCCGAAAGAAGTCGGTTGCCAAGAGAAGTTTGGGTTCTAAACCTAAAGTAGGTGCCACTGCTAAACAGAAAAAATCACTTTCCCTGACTAAAACTACCCTGCAAGGTGAAGGTGAAACTTTTTCCAGTGGAAGCAAAGAGGTTGCAACTGGTGATGCGAGGATGCATCAGGGATGCCCCCAAATCTTTGATGTTAATAAAACAACAGAGCAAGAAACAGTTAGTAAAAATGCTGGTGACAGAACTGAGTTTTTGGACGATGAAACTGAGGCTCCAGATGACAAATGTGAATATGAGTTAGGAATGGCCCTTGACGAAGACTTGGTTCATCTTTCAAAAAAGCCAGATACAGCAAAAGAAGAGAAGTCAGAAGCAACTTACCCTGCAACAAAATGTGAAGAGGCAATGCCTCCTAAGAATGGCACAAATAAAACTGAAAAACAGAAAACATCTTCACTGGCAGTAAAGCATCAAGCTAGAAAACTTCCTGCTGGTAAAGTCAAGGCCACAGTTAGTAAATATGCAGAAGATGATGGTGACAGAACTGAGCTTGTGGGGGATGAAACCGAGGCTCCAGATGGCAAATGTGAACCCGAGTTACGAATGGCACTCGATGAAGAATCTCATCTTTCAAAAAAATCAGATACAGCAACAGAAGAGAAGTCGGAAGTAATTTGCCCTGAAACAAAATGTGAAGAGCCAATGCCTCCTAAGAAAGGCACAAAAAAAACTGAAAAACAGAAGCCATCTTCACTGGTAGTAAAGAATCAAGCAAGAAAACGTCCTGCTGGTAAAACCAAGGCCAAAGTTGCCAAGGAATTACCAAAATCTATGGCAGTATATGGGGAGAAGATTCCTAATGAGACCGAGCATGAGCCAGAGATAGAAACCATGGAAGAAATGCCCCTTCCTGATGATAAAAGTGACCAGCCAGCCATTCAAAGAAATAAGTCAGAGAATTTTGCTGAAGAGAAGGAGAATAGGCCAATTGATGGAGAGCAGGGCAAAAGCAATGGCAGTTCAACTATTAAATCTAGTGTAAGGACAGCAAAGATCAAGTCTAAGAAATCGGGGCTCAATCCATCTATAACAGAATCTAACACGAGAGTGAAAACTGAAGCCGCATGTTTTATATTAAGTGGGCATCGTCTACAGAGAAAAGAGTTTCAACAAGTAATCAAGCGATTAAAAGGAAGGGTTTGCCGGGATTCTCACCAGTGGTCATATCAGGCGACACACTTCATAGCTCCAGACCCCATACGCAGGACTGAGAAATTTTTTGCTGCTGCTGCATCAGGAAGGTGGATTCTAAAAACTGATTTCCTAACTGCCAGTAGCCAGGCAGGAAAATTGTTGGCAGAGGAGCCTTATGAGTGGCACCAGAATGGTTTCAGTGAGGATGGCACAATTAATATGGAGGCTCCAAGAAAGTGGCGGCTGTTGAAAGAAAGAACAGGTCATGGAGCCTTCTATGGAATGCGTATTGTTGTATACGGCGATTGCATTGCCCCACCTTTGGATACTCTGAAACGTGTCATTAAAGCTGGAGATGGAACAATATTAGCAACTTCTCCTCCTTATACTCGCTTCCTTAGTACAGGAATCGACTATGCTGTAGTTAGCCCTGGCATGCCACGTGTTGACATGTGGGTGCAAGAGTTCTTAAAACATGAGATACCTTGTGTTGTAGCGGACTACTTGGTTGAGTATGTTTGCAAGCCCGGGTTCTCCCTTGAGAGACATGTATTATATGGCACTCATGCTTGGGCAGAGAGATCATTTGATAAACTTAAAAGCAAGGCAGAAGAGATTGTTGAAGAACTCGTTGCTCCTGAGGATTCTGGTGATGATCATGATCATGATATAATTTGCAAAGTATGTGGATCCCGCGATAGAGGAGATGTAATGCTGATTTGTGGTGATGAAAGTGGTTCCGTCGGATGTGGAATCGGTACTCATATCGATTGCTGCGATCCTCCTCTAACACATGTACCTGAGGAAGATTGGTTTTGCCCAAAATGCAGTAGCAACCGAAACTGCTCAAACAATCCCAGTAAAAGGAAAAAGACTGTTTTATCTTCATCAGTGTATGTGAGGTGA | 3957 | 0.4236 | MMEATYPSPMFRGVRFVLRGFNPVAQNQIRFKLANGGGVDVGQYGGSCTHVIVDNVAYDDPVCVAARNDRKTVVTALWVEHSADIGMPVDATSVMYRPLKDLDGIPGAKDLIMCLTGYLRQDRDDIMTMVGLMGAQFSKPLVANKVTHLICYKFEGEKYELAKKLGTIKLVNHRWLEDCLKEWVLLPEDKYNKSGFELEMMEEEAKDSEQEAEDSKLGQSGGRKRKQSPLSSKIGIAATPGLSKSATEASNALPDSTGPQVLPNVNNGENSLTVPGNKSRPDQGSSFHNVDDSKVSYQAADISRHSTSCQLPNKYVKTSESKNADSPKAPGCQDLGNMGNTNSSDQQPDLNGDISESKKVASDLRETSASAAGVAHSNEKLRTASYSRKNQKGFTLPRILDESSGREGNNCDNSKVQKASEGVKSTSVEVSGKGNDFVKDEPISLLPQKRINKASFTKLKSRKKTSVPSANGKSQGLKVTSQVDEPPEADDYFSIGKDGINNSNTCLVSKPSGSTSNSLAFDELLSRNASPESVQCDNVCQNSSKMAVQSLSESKINGKPDITGSGMQQVGGNEVEQHTVTKNLDCSSLGNKKSCNVESAGCTKLDLGTEESNKLVSKSPRKKSVAKRSLGSKPKVGATAKQKKSLSLTKTTLQGEGETFSSGSKEVATGDARMHQGCPQIFDVNKTTEQETVSKNAGDRTEFLDDETEAPDDKCEYELGMALDEDLVHLSKKPDTAKEEKSEATYPATKCEEAMPPKNGTNKTEKQKTSSLAVKHQARKLPAGKVKATVSKYAEDDGDRTELVGDETEAPDGKCEPELRMALDEESHLSKKSDTATEEKSEVICPETKCEEPMPPKKGTKKTEKQKPSSLVVKNQARKRPAGKTKAKVAKELPKSMAVYGEKIPNETEHEPEIETMEEMPLPDDKSDQPAIQRNKSENFAEEKENRPIDGEQGKSNGSSTIKSSVRTAKIKSKKSGLNPSITESNTRVKTEAACFILSGHRLQRKEFQQVIKRLKGRVCRDSHQWSYQATHFIAPDPIRRTEKFFAAAASGRWILKTDFLTASSQAGKLLAEEPYEWHQNGFSEDGTINMEAPRKWRLLKERTGHGAFYGMRIVVYGDCIAPPLDTLKRVIKAGDGTILATSPPYTRFLSTGIDYAVVSPGMPRVDMWVQEFLKHEIPCVVADYLVEYVCKPGFSLERHVLYGTHAWAERSFDKLKSKAEEIVEELVAPEDSGDDHDHDIICKVCGSRDRGDVMLICGDESGSVGCGIGTHIDCCDPPLTHVPEEDWFCPKCSSNRNCSNNPSKRKKTVLSSSVYVR | 1318 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma10g00134 | 1318 | MobiDBLite | consensus disorder prediction | 406 | 432 | - | - | |
| Gma10g00134 | 1318 | MobiDBLite | consensus disorder prediction | 299 | 326 | - | - | |
| Gma10g00134 | 1318 | Pfam | BRCA1 C Terminus (BRCT) domain | 999 | 1063 | IPR001357 | - | |
| Gma10g00134 | 1318 | PANTHER | BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED | 1 | 1293 | - | - | |
| Gma10g00134 | 1318 | MobiDBLite | consensus disorder prediction | 730 | 747 | - | - | |
| Gma10g00134 | 1318 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1228 | 1316 | IPR013083 | - | |
| Gma10g00134 | 1318 | Gene3D | BRCT domain | 1 | 95 | IPR036420 | - | |
| Gma10g00134 | 1318 | Gene3D | BRCT domain | 1105 | 1206 | IPR036420 | - | |
| Gma10g00134 | 1318 | SUPERFAMILY | BRCT domain | 109 | 192 | IPR036420 | - | |
| Gma10g00134 | 1318 | ProSiteProfiles | BRCT domain profile. | 109 | 193 | IPR001357 | - |
Showing 1 to 10 of 38 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma10g00134 | K10728 | - | gmx:100783461 | 2588.14 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma10g00134 | 10 | 1289755 | 1296477 | Gma10g00134 | 10 | 1289755 | 1296477 | ECH | |
| Gma10g00134 | 10 | 1289755 | 1296477 | Gma02g00130 | 02 | 1262933 | 1269365 | GST |
Showing 1 to 2 of 2 entries