Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00126 ATGGCTTCGATTCCGCGTCCGGCGAGTTCGGGATCTTCGGAGGGAGGAGGAGATCCGGCTGCGATGGACGAGAGAAAGAGGAAGCGGATGGAGTCGAACCGCGAGTCCGCACGGCGATCGCGGATGAAGAAGCAGAAGCTGCTCGAAGACCTATCCGACGTAGCGAGTCGCCTTCAAGGCGAGAACGTGCGCTTAGCGCAGAGCATAAAGGCGAAGGAGGAAGCGTACGTTGAGATCGAAGCCGCGAACGACATCCTCAGAGCACAGACCATGGAACTCGCCGACCGGTTAAGGTTTCTGAACTCCATTCTCGAGATCGCCGATGAGGTCGGCGGCGGTGGTGAATCCTTCGAGATTCCGCAGATTCCAGACCCTCTCTTCATGCCCTGGCAGATCCCCCACCCTATGATGGCGTCACCTGACATGCTCCTCCATGGAAATCAAGGCCTGTTTGCTTGA 459 0.5795 MASIPRPASSGSSEGGGDPAAMDERKRKRMESNRESARRSRMKKQKLLEDLSDVASRLQGENVRLAQSIKAKEEAYVEIEAANDILRAQTMELADRLRFLNSILEIADEVGGGGESFEIPQIPDPLFMPWQIPHPMMASPDMLLHGNQGLFA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00126 152 Coils Coil 69 89 - -
Gma10g00126 152 SUPERFAMILY Leucine zipper domain 25 75 IPR046347 GO:0003700|GO:0006355
Gma10g00126 152 CDD bZIP_plant_GBF1 26 76 IPR045314 GO:0003700|GO:0006355
Gma10g00126 152 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 142 - -
Gma10g00126 152 Pfam bZIP transcription factor 25 76 IPR004827 GO:0003700|GO:0006355
Gma10g00126 152 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 70 IPR004827 GO:0003700|GO:0006355
Gma10g00126 152 MobiDBLite consensus disorder prediction 19 45 - -
Gma10g00126 152 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Gma10g00126 152 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Gma10g00126 152 Gene3D - 23 78 - -
Gma10g00126 152 MobiDBLite consensus disorder prediction 1 45 - -
Gma10g00126 152 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00126 Gma-Chr10 1203136 1204444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00126 12 143 bZIP Transcription Factor Family AT3G62420 47.826 1.08e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma10g00126 bZIP_1 4.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00126 K25786 - gmx:778130 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00126 10 1203136 1204444 Gma10g00126 10 1203136 1204444 ECH
Gma02g00121 02 1167252 1168570 Gma10g00126 10 1203136 1204444 ECH
Gma10g00126 10 1203136 1204444 Gma02g00121 02 1167252 1168570 GST
Gma19g02055 19 49482516 49483756 Gma10g00126 10 1203136 1204444 PCT
Gma03g02020 03 45800854 45802065 Gma10g00126 10 1203136 1204444 PCT
Gma10g00126 10 1203136 1204444 Gma19g02055 19 49482516 49483756 PCT
Gma10g00126 10 1203136 1204444 Gma03g02020 03 45800854 45802065 PCT