Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00121 ATGGTGTCCAAACCTACCGACTCTGCTTCCAAACCTCGAAAACAACATGGAGAGCCAGCAAATGATGCAATTGGAAACTTGTCCCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATATTGTACATTAAAGAAAAAATTCAGAGCAATGAGAAGAAGCTACAATTTCATATGTCAGGAGTCCTGTCAGAAATATCAACAAGGGGATCTTCACCGCCAGAGGAAAATAGGAAAACTCCAATTCTTTCTTCAAGAATTGACCATCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGGAGACAAAGACCACAGCAATCAAGATGCATTATCTGCTACAAGTATCAAAATTCCATATATTGAAACATTACCGCCATATACCTCTTGGATATTTCTAGACAGAAATCAGAGGATGGCAGAAGATCAGTCAGTGGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAGGAGTTAACAGGACCCGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTATATGGATGGCATTTGAGGAATATGGGTTAAACGACGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTACAAAACTATCAAGGAAAAGAACATTGGCAGGTTGGACCAGCCTTCTGAAAACTCAGGAGAATATGAATCTATTATTGGCATATGTCCAGAGAAAAGCCTGAGTGCCGCATTAGATTCATTTGATAATCTTTTTTGTCGCCGTTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGACAGTTTGGTCTGATCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGTTAAAGGTAGTAAAAAATGTGACAGAAGATTCAACTTCTGGGTCTGATCAGAATAAGAGAACTACAATTACAGAAGAGGCAGATGTGAAATTGGCTCCCTCCATTATAGAGGAACCTAGTAATCAGAGTATAGCACCTTTTCCAACAGAAGTTGATTGTCTTGGATCTCTTAATTTAAATGTTCCTATCTCAGTGAGTGTGGAAAAATGGAAAGTCCCAAATCAGTCAGACACAGCACTCCGTGACTCATCACTCCCTCCTGATGATTCTCAGCATTCTTATAAAAAGCTGAAGACAATATCTGATGATGTAGTTACTGCAAATAGTGATTCTAGCAAGAACATAAATTTTGGTGCATGTGATGAAAGTATACATACAATTACTAGTGGACTTTTGGACAAATCTGTTAAAGATAATTCAAATAAATTAATAGATTCTTCTAGCACTTGCTGTAGTGATGAGCAGGACAAAAGTATTGGGGATGGACCAAAAGATCCTACAAATAAGACAGAATTTAAGAAGTTGTCCAATTCAATGGAAGGGAAAGTTGATGGGATGCTAAGGGTTTCAGATTGGAAACCTCTGGAAAAAGAATTATACTTAAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCCTGAAGACTTGTATGGAAATATCTAGTTACATGCATTCTGGAGGAGTGTCAATGCCCCATGGATCTATTGTTGCTCCTAGTTCAATCATGGAAGACAAGGGAAAATTTGATGCAGAGTGCACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGGGGTAAAACAAGGAAATTTAAATATTCTTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACTTGCTGTGAGAAATATTGCGGTTGTTCTAAAAGCTGCAAAAATCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAGTGTAGAAGTCGACAATGCCCATGCTTTGCTGCAGGACGGGAATGTGACCCAGATGTCTGTCGGAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGAAGGGCAATGTGGAAATATGAGGCTTCTATTAAGACAACAACAGAGGATTCTCTTGTCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCAGTAAACAAAAATGATTACTTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCAGATAAACGTGGGAAAATATATGATCGTGCCAACTCGTCTTTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAATTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATCGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTATGGTCCAGATCAAGCACCACCATGGGCACGTAAACCTGAGGGTTCCAAGAGAGACGAATCAACAGCTTCTCAAGGCAGAGCTAAGAAACACCAGTCTCATTGA 2610 0.4092 MVSKPTDSASKPRKQHGEPANDAIGNLSLKINQLKKQIQAERILYIKEKIQSNEKKLQFHMSGVLSEISTRGSSPPEENRKTPILSSRIDHPLCKFSGFSPVSGDKDHSNQDALSATSIKIPYIETLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTGPEEEKHEFSEAEDRVIWMAFEEYGLNDEVLNIVSEFVGGTSLEIQERYKTIKEKNIGRLDQPSENSGEYESIIGICPEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLIYPSEKQTVWSDPEGDRKPCSDQCYLQLKVVKNVTEDSTSGSDQNKRTTITEEADVKLAPSIIEEPSNQSIAPFPTEVDCLGSLNLNVPISVSVEKWKVPNQSDTALRDSSLPPDDSQHSYKKLKTISDDVVTANSDSSKNINFGACDESIHTITSGLLDKSVKDNSNKLIDSSSTCCSDEQDKSIGDGPKDPTNKTEFKKLSNSMEGKVDGMLRVSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEISSYMHSGGVSMPHGSIVAPSSIMEDKGKFDAECTDQEMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLSKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESTASQGRAKKHQSH 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00121 869 SUPERFAMILY SET domain 621 838 IPR046341 -
Gma10g00121 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 14 867 - -
Gma10g00121 869 ProSiteProfiles SET domain profile. 720 835 IPR001214 GO:0005515
Gma10g00121 869 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 869 IPR025778 GO:0031519
Gma10g00121 869 Pfam CXC domain 659 690 IPR041355 -
Gma10g00121 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 14 867 IPR045318 GO:0006338|GO:0018024
Gma10g00121 869 SMART CXC_2 655 692 IPR033467 -
Gma10g00121 869 Pfam SET domain 731 834 IPR001214 GO:0005515
Gma10g00121 869 MobiDBLite consensus disorder prediction 1 24 - -
Gma10g00121 869 MobiDBLite consensus disorder prediction 469 483 - -
Gma10g00121 869 ProSiteProfiles CXC domain profile. 607 706 IPR026489 -
Gma10g00121 869 Gene3D SET domain 621 837 IPR046341 -
Gma10g00121 869 SMART sant 179 229 IPR001005 -
Gma10g00121 869 SMART sant 500 550 IPR001005 -
Gma10g00121 869 MobiDBLite consensus disorder prediction 846 862 - -
Gma10g00121 869 CDD SET_EZH 720 836 - -
Gma10g00121 869 MobiDBLite consensus disorder prediction 458 483 - -
Gma10g00121 869 MobiDBLite consensus disorder prediction 841 869 - -
Gma10g00121 869 SMART set_7 720 841 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00121 Gma-Chr10 1167250 1177384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00121 709 838 C2H2 Transcription Factor Family AT2G23740 26.531 2.71e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma10g00121 SET 1e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00121 10 1167250 1177384 Gma10g00121 10 1167250 1177384 ECH
Gma10g00121 10 1167250 1177384 Gma02g00116 02 1132150 1140854 GST
Gma19g02059 19 49510711 49516290 Gma10g00121 10 1167250 1177384 PCT
Gma03g02025 03 45831766 45836921 Gma10g00121 10 1167250 1177384 PCT
Gma10g00121 10 1167250 1177384 Gma19g02059 19 49510711 49516290 PCT
Gma10g00121 10 1167250 1177384 Gma03g02025 03 45831766 45836921 PCT