Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00120 ATGGATACTAACATGGCTGTTGCATGCCATCAAAAAATTCCTTTCAATCAAATGATGCAGTTTTCTGGGGTGCAAGCCATAGTGGAAAATGTTGCATCAAAAACCAAAATTCATCTGATAAACCTTGATATTGGATGTGGAGTGCAATGCATGGCTTTGATGCAAGCACTGGCTGAGAGACAGGAAGAGCAAGTTGAGATTCTGAAGATAACTGCCATTGGACTTCAAGGCAAGACCGAGCCAGAAAAGACAGGGAAAAGGTTAGTGAGTTTTGCTGAATCCTTAAACTTGCCCTTTTTATATAAGGTAGTTTTTGTCACAAGCATCATAGAGATCAAGGTAGAGCAATTTGGCATTGAAGATAATGAAGCTGTAGCTGTATATTCTCCTTATATGCTGAGGACTATGGTGTCGGATTCTGATTCCTTGGAACACTTGATTCGGGTGATGAGAAAAATCAGACCAAGTATAATGATAATTCTTGAGTTGGAAGCAAAGCATCATTCACCCACCTTTGTGAATCGCTTCATTGAGGCATTGTTCTTCTATTCAGCATTTTCTGACTGCATTGAGACCTGCATGAAGCAGGATTATGAATGCAGAATGAGAATTGAGGGAATATTATCAGAAGGGATACGAAACATTGTTGCTATGGAAGATGGAGAAAGGATGGTTAGGAATGTGAAGATAGATGTTTGGAGAAGATTCTTTGCAAGTTCATTCCGAAAGCAATCTCAGGCCAATCCAAAGCAACAAAACACAGGGACAAGTGTAACTTCCCTTACCTTGCGTGGTTTTAAGTTTGGGTTGCCTGAAGAGGATGAGAAAGAAAAAGGCTTTAGGTCCAAAGGTATGGCTTTTCCACCACTGTACTACCACACACTATATTGGATTTTCTCTAAAGCTCTAGAGTGTATGAAACTATGCAATAGAGTGTGGAACTCTACTAATCCACCTTGGGATGTCTTGGGGGAGAAGAAATGA 984 0.4024 MDTNMAVACHQKIPFNQMMQFSGVQAIVENVASKTKIHLINLDIGCGVQCMALMQALAERQEEQVEILKITAIGLQGKTEPEKTGKRLVSFAESLNLPFLYKVVFVTSIIEIKVEQFGIEDNEAVAVYSPYMLRTMVSDSDSLEHLIRVMRKIRPSIMIILELEAKHHSPTFVNRFIEALFFYSAFSDCIETCMKQDYECRMRIEGILSEGIRNIVAMEDGERMVRNVKIDVWRRFFASSFRKQSQANPKQQNTGTSVTSLTLRGFKFGLPEEDEKEKGFRSKGMAFPPLYYHTLYWIFSKALECMKLCNRVWNSTNPPWDVLGEKK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00120 327 Pfam GRAS domain family 11 239 IPR005202 -
Gma10g00120 327 ProSiteProfiles GRAS family profile. 1 297 IPR005202 -
Gma10g00120 327 Coils Coil 51 71 - -
Gma10g00120 327 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 244 IPR005202 -
Gma10g00120 327 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 1 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00120 Gma-Chr10 1162139 1163930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00120 5 245 GRAS Transcription Factor Family AT1G66350 30.864 5.57e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma10g00120 GRAS 6.3e-53 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00120 - - ccaj:109806982 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00120 10 1162139 1163930 Gma10g00120 10 1162139 1163930 ECH