Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00109 ATGGAGAAGAAAGAGATGGCTGTGAAAACTGAGGATGCGGTTGGGTCCTCTTCTTTCCCTTGTTATAATTATTCAAACCTTTATCCATTCTCGAACGCGTTTGATTTCTCTGAGGTTGAAAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTGCAGGACTATAGTCCTCTGCTTGAGTTGCCTCAACTTTCAACTGTGTCCGTGCAATCTCATCATCACTCTACAGTTACGGTTCCTTCTGATAACGGGAAAGAGTGTTCTGAGGTGTTGAACCACCAGCCTGCCACTCCAAACTCTTCTTCCATTTCATCCGCGTCCACTGATGCAGTCAATGATGAACAGAAGAAGACTCTAGACCAAGCAGAAGAAGAAGATGATGATGATGATGATGAAGGACAACACAAGACTAAGAAACAGTTGAAGCCCAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAATAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACGTGTGGAGAGATCTTTCACTGATCCAAGCGTTGTAGTGACAACCTATGAAGGCCAACACACACATCCCAGCCCAGTTATGCCTCGCTCAGTTGTCTCTTCTGGATACGCCAACAACTTTGCTTCAGTTTTGCCACTAGGAAACTACTTATCCCAGTATCAGCAGCAGCACCATCACCACCAACAACAAAAGCTACTTGTCAACACATTGTCCTCTTTGGGTTTTCCTTACAATGATTCTTCATCTCCAAAGAACGCTGTTTTTATTCAAGAGAGACGGCTTTGTAGTAATCAAGGGACGAATGCGTTTCTGAGGGACCATGGACTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGTAG 975 0.4431 MEKKEMAVKTEDAVGSSSFPCYNYSNLYPFSNAFDFSEVEKSSLGFMELLGVQDYSPLLELPQLSTVSVQSHHHSTVTVPSDNGKECSEVLNHQPATPNSSSISSASTDAVNDEQKKTLDQAEEEDDDDDDEGQHKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSVVSSGYANNFASVLPLGNYLSQYQQQHHHHQQQKLLVNTLSSLGFPYNDSSSPKNAVFIQERRLCSNQGTNAFLRDHGLLQDVVPSHMLKEE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00109 324 SUPERFAMILY WRKY DNA-binding domain 159 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma10g00109 324 PANTHER WRKY TRANSCRIPTION FACTOR 1 316 - -
Gma10g00109 324 Coils Coil 112 132 - -
Gma10g00109 324 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 316 IPR044810 GO:0003700
Gma10g00109 324 MobiDBLite consensus disorder prediction 72 112 - -
Gma10g00109 324 PIRSF WRKY_txn_fact_IIc 1 324 IPR017396 GO:0003700
Gma10g00109 324 SMART WRKY_cls 167 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma10g00109 324 MobiDBLite consensus disorder prediction 72 156 - -
Gma10g00109 324 Pfam WRKY DNA -binding domain 168 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma10g00109 324 Gene3D WRKY domain 152 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma10g00109 324 ProSiteProfiles WRKY domain profile. 162 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00109 Gma-Chr10 1086339 1089572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00109 35 324 WRKY Transcription Factor Family AT2G47260 47.500 3.92e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma10g00109 WRKY 3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00109 - - gmx:732591 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00109 10 1086339 1089572 Gma10g00109 10 1086339 1089572 ECH
Gma10g00109 10 1086339 1089572 Gma02g00104 02 1054439 1056767 GST
Gma19g02070 19 49613149 49614703 Gma10g00109 10 1086339 1089572 PCT
Gma03g02033 03 45929063 45930996 Gma10g00109 10 1086339 1089572 PCT
Gma10g00109 10 1086339 1089572 Gma19g02070 19 49613149 49614703 PCT
Gma10g00109 10 1086339 1089572 Gma03g02033 03 45929063 45930996 PCT