Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00095 ATGGTGGCTGAAGCAGAGGTTGTGTGTCAACAAAACGTGGGTGTGTTGGATGTGAAGCATTTTCCAAATAAGGTAAGCGATGTTCACGAGATCGGAGACGCAGATGCTAATTCGCCTCCGAGTTTTGACCGAGTTCGTGCCACTGAGTCGGTCTCCGCCGAGTTACTCACTTCACAAGAAGATGTTAAGTCTGCAGACAGGATCTCAGATGCTGCTCTAGAATCTGCGGTTCTGCAATTTATCCCATGCATCCGTTCTGGTAGTTTTGCTGACATTGGGCCACGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCGTCTCATCTGGGATCTCTATACAACTTTCCAAAACCAAGTGCCTTCTATGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCGGCTTATATAAGAAAACACGTGATAAAATTCTTCTTCGAAGATGTCAGTTTCCCACAGACATCCGAAGTCGATAATGTATTTTTGGAAGAGGTAGAGGATTCCCTCAGAAAGGCATTTCTTTTGGCTGATTCAGCTTTGGCCGATGATTGCAGCGTGAATAGTTCATCAGGCACTACGGCCCTTACTGCTTTGATATTTGGAAGGCTTCTAATGGTGGCCAATGCTGGCGACTGCCGAGCAGTTCTCTGTCGCAAAGGAGAGGCCATTGACATGTCTGAAGATCACAGGCCTATTTATCTATCAGAGCGGAGGCGAGTTGAAGAATTGGGTGGCTACATAGAAGATGGTTATCTGAATGGGGTTTTATCAGTTACTCGAGCACTAGGGGACTGGGACATGAAGTTACCTAAGGGTGCTCCCTCACCTTTGATTGCAGAGCCTGAGTTTCGGCAAGTGGTTCTAACAGATGATGATGAATTCCTCATCATTGGATGCGACGGCATCTGGGATGTGATGTCAAGTCAGCATGCTGTTAGCCTTGTTCGGAAAGGCCTGAGGCGGCACGATGACCCAGAGAAATGCGCCAGGGACCTGGTTATGGAGGCATTACGTCTCAACACATTCGACAATCTCACTGTGATCATTGTATGTTTCTCTTCCCTTGACCACGCGGAGCCAGAGCCATCCCCTCCTCGCCAACGGAAATTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGGAGCTTGTTGGAAGGCAGTGCAAGCAACTGA 1191 0.4786 MVAEAEVVCQQNVGVLDVKHFPNKVSDVHEIGDADANSPPSFDRVRATESVSAELLTSQEDVKSADRISDAALESAVLQFIPCIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLYNFPKPSAFYGVFDGHGGPEAAAYIRKHVIKFFFEDVSFPQTSEVDNVFLEEVEDSLRKAFLLADSALADDCSVNSSSGTTALTALIFGRLLMVANAGDCRAVLCRKGEAIDMSEDHRPIYLSERRRVEELGGYIEDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQVVLTDDDEFLIIGCDGIWDVMSSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCFSSLDHAEPEPSPPRQRKLRCCSLSAEALCSLRSLLEGSASN 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00095 396 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Gma10g00095 396 SMART PP2C_4 74 353 IPR001932 -
Gma10g00095 396 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 378 - -
Gma10g00095 396 SUPERFAMILY PP2C-like 79 357 IPR036457 -
Gma10g00095 396 Gene3D - 69 361 IPR036457 -
Gma10g00095 396 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Gma10g00095 396 CDD PP2Cc 84 355 IPR001932 -
Gma10g00095 396 PANTHER PROTEIN PHOSPHATASE 2C 1 378 IPR015655 GO:0004722|GO:0006470
Gma10g00095 396 Pfam Protein phosphatase 2C 95 347 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00095 Gma-Chr10 934090 936327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00095 98 392 PP2C-type Phosphatase Gene Family AT3G62260 71.622 4.90e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00095 K14803 - gmx:100819791 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00095 10 934090 936327 Gma10g00095 10 934090 936327 ECH
Gma10g00095 10 934090 936327 Gma02g00087 02 917845 920103 GST