Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00085 ATGGACCTTTCCATCAACGAAAGAAGCCTTGTTAGAGAAAGACAAGAGGAAGAAGAAGAAGAAGAAGATGAAAGAGACAACGGTGATGAACCCAAAGAGGGTGCAGTTGAGGCTGGAACACGCAGGCCAAGAGGGAGACCCCCTGGTTCCAAAAACAAGCCCAAACCCCCCATCTTCGTCACCAGGGACAGCCCAAACTCCCTCAGAAGCCATGTCATGGAGGTTGCCGGCGGGGCCGACGTGGCGGAAAGCGTGGCCCAGTTTGCACGGAGGCGCCAGCGTGGGGTGTGTGTCCTCAGTGGGAGCGGTTCCGTGGCCAACGTTACTCTCCGGCAACCTTCGGCACCGGGAGCGGTTGTGGCACTTCATGGAAGGTTTGAAATTCTGTCCCTAACCGGAGCGTTTCTGCCTGGTCCTGCCCCGCCAGGAGCTACAGGACTTACTGTGTATCTCGCTGGAGGGCAGGGCCAGGTAGTGGGAGGGAGCGTCGTGGGCTCCCTTGTGGCAGCTGGACCAGTCATGGTGATTGCTGCCACTTTTGCTAATGCTACCTATGAGAGGTTGCCCCTTGAGGAGGAGGAAGACGACGGTGGTGGTAGCGTGCAAGGAGGGAGTACCCTAGGAGGATCTCCTCATGGAATTGGTAGTAGCGGCGGCGGTGGCGGTAGTGGTGGTGGCCACTTACCAGTTTGA 693 0.5786 MDLSINERSLVRERQEEEEEEEDERDNGDEPKEGAVEAGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPSAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLEEEEDDGGGSVQGGSTLGGSPHGIGSSGGGGGSGGGHLPV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00085 230 Coils Coil 7 27 - -
Gma10g00085 230 SUPERFAMILY AF0104/ALDC/Ptd012-like 65 193 - -
Gma10g00085 230 PIRSF ESCAROLA 3 227 IPR014476 GO:0003680
Gma10g00085 230 MobiDBLite consensus disorder prediction 1 15 - -
Gma10g00085 230 Gene3D - 68 195 - -
Gma10g00085 230 Pfam Plants and Prokaryotes Conserved (PCC) domain 69 181 IPR005175 -
Gma10g00085 230 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 14 223 IPR014476 GO:0003680
Gma10g00085 230 CDD DUF296 69 152 IPR005175 -
Gma10g00085 230 MobiDBLite consensus disorder prediction 191 230 - -
Gma10g00085 230 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 14 223 - -
Gma10g00085 230 MobiDBLite consensus disorder prediction 1 66 - -
Gma10g00085 230 ProSiteProfiles PPC domain profile profile. 65 204 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00085 Gma-Chr10 828112 829152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00085 31 217 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 76.596 2.35e-86 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00085 - - gmx:102663643 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00085 10 828112 829152 Gma20g00864 20 34674613 34676395 GST